Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.25■□□□□ 0.83
TNFSF9P41273 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TNFSF9P41273 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TNFSF9P41273 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TNFSF9P41273 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
TNFSF9P41273 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
TNFSF9P41273 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.25■□□□□ 0.83
TNFSF9P41273 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TNFSF9P41273 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.24■□□□□ 0.83
TNFSF9P41273 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TNFSF9P41273 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TNFSF9P41273 AL499627.1-201ENST00000569373 2188 ntBASIC20.24■□□□□ 0.83
TNFSF9P41273 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.24■□□□□ 0.83
TNFSF9P41273 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TNFSF9P41273 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
TNFSF9P41273 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.24■□□□□ 0.83
TNFSF9P41273 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TNFSF9P41273 FAM8A6P-201ENST00000407496 1135 ntBASIC20.24■□□□□ 0.83
TNFSF9P41273 SPDYE15P-201ENST00000424157 909 ntBASIC20.24■□□□□ 0.83
TNFSF9P41273 SNX5-210ENST00000481323 562 ntTSL 3 BASIC20.24■□□□□ 0.83
TNFSF9P41273 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.24■□□□□ 0.83
TNFSF9P41273 AL590326.2-201ENST00000625139 305 ntBASIC20.24■□□□□ 0.83
TNFSF9P41273 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.24■□□□□ 0.83
TNFSF9P41273 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
TNFSF9P41273 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TNFSF9P41273 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
TNFSF9P41273 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TNFSF9P41273 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
TNFSF9P41273 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TNFSF9P41273 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TNFSF9P41273 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TNFSF9P41273 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.24■□□□□ 0.83
TNFSF9P41273 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
TNFSF9P41273 AC034236.2-201ENST00000606662 1610 ntBASIC20.24■□□□□ 0.83
TNFSF9P41273 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.23■□□□□ 0.83
TNFSF9P41273 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TNFSF9P41273 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.23■□□□□ 0.83
TNFSF9P41273 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
TNFSF9P41273 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TNFSF9P41273 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.23■□□□□ 0.83
TNFSF9P41273 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TNFSF9P41273 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TNFSF9P41273 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
TNFSF9P41273 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.23■□□□□ 0.83
TNFSF9P41273 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.23■□□□□ 0.83
TNFSF9P41273 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.23■□□□□ 0.83
TNFSF9P41273 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
TNFSF9P41273 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.23■□□□□ 0.83
TNFSF9P41273 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.23■□□□□ 0.83
TNFSF9P41273 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
TNFSF9P41273 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.23■□□□□ 0.83
TNFSF9P41273 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TNFSF9P41273 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TNFSF9P41273 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.23■□□□□ 0.83
TNFSF9P41273 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TNFSF9P41273 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TNFSF9P41273 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TNFSF9P41273 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.23■□□□□ 0.83
TNFSF9P41273 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.22■□□□□ 0.83
TNFSF9P41273 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
TNFSF9P41273 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.22■□□□□ 0.83
TNFSF9P41273 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TNFSF9P41273 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TNFSF9P41273 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TNFSF9P41273 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
TNFSF9P41273 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TNFSF9P41273 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TNFSF9P41273 AC018445.3-201ENST00000624177 1945 ntBASIC20.22■□□□□ 0.83
TNFSF9P41273 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.22■□□□□ 0.83
TNFSF9P41273 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
TNFSF9P41273 HOXB1-202ENST00000577092 1414 ntBASIC20.22■□□□□ 0.83
TNFSF9P41273 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.22■□□□□ 0.83
TNFSF9P41273 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
TNFSF9P41273 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TNFSF9P41273 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TNFSF9P41273 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TNFSF9P41273 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TNFSF9P41273 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC20.22■□□□□ 0.83
TNFSF9P41273 AC092647.4-201ENST00000457211 535 ntBASIC20.22■□□□□ 0.83
TNFSF9P41273 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TNFSF9P41273 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.22■□□□□ 0.83
TNFSF9P41273 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TNFSF9P41273 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC20.22■□□□□ 0.83
TNFSF9P41273 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TNFSF9P41273 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TNFSF9P41273 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.22■□□□□ 0.83
TNFSF9P41273 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TNFSF9P41273 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TNFSF9P41273 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TNFSF9P41273 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TNFSF9P41273 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TNFSF9P41273 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.22■□□□□ 0.83
TNFSF9P41273 CROCCP3-202ENST00000420820 1947 ntBASIC20.21■□□□□ 0.83
TNFSF9P41273 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
TNFSF9P41273 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
TNFSF9P41273 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
TNFSF9P41273 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TNFSF9P41273 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TNFSF9P41273 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC20.21■□□□□ 0.83
TNFSF9P41273 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms