Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HADHAP40939 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HADHAP40939 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HADHAP40939 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.62
HADHAP40939 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.62
HADHAP40939 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HADHAP40939 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.95■□□□□ 0.62
HADHAP40939 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
HADHAP40939 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.95■□□□□ 0.62
HADHAP40939 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HADHAP40939 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.95■□□□□ 0.62
HADHAP40939 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HADHAP40939 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.95■□□□□ 0.62
HADHAP40939 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HADHAP40939 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HADHAP40939 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HADHAP40939 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HADHAP40939 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.95■□□□□ 0.62
HADHAP40939 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
HADHAP40939 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
HADHAP40939 TSPY7P-201ENST00000431358 1114 ntBASIC18.95■□□□□ 0.62
HADHAP40939 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.95■□□□□ 0.62
HADHAP40939 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.95■□□□□ 0.62
HADHAP40939 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.95■□□□□ 0.62
HADHAP40939 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HADHAP40939 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HADHAP40939 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.95■□□□□ 0.62
HADHAP40939 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.95■□□□□ 0.62
HADHAP40939 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HADHAP40939 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.95■□□□□ 0.62
HADHAP40939 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.95■□□□□ 0.62
HADHAP40939 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
HADHAP40939 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HADHAP40939 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HADHAP40939 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HADHAP40939 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
HADHAP40939 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
HADHAP40939 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
HADHAP40939 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HADHAP40939 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HADHAP40939 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HADHAP40939 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
HADHAP40939 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
HADHAP40939 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HADHAP40939 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HADHAP40939 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HADHAP40939 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
HADHAP40939 UNC93B2-201ENST00000285383 730 ntBASIC18.94■□□□□ 0.62
HADHAP40939 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.94■□□□□ 0.62
HADHAP40939 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
HADHAP40939 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HADHAP40939 SNORA78-201ENST00000459373 127 ntBASIC18.94■□□□□ 0.62
HADHAP40939 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.94■□□□□ 0.62
HADHAP40939 AC097488.1-201ENST00000507834 756 ntBASIC18.94■□□□□ 0.62
HADHAP40939 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.94■□□□□ 0.62
HADHAP40939 SLC25A1P4-201ENST00000567977 778 ntBASIC18.94■□□□□ 0.62
HADHAP40939 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.94■□□□□ 0.62
HADHAP40939 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.94■□□□□ 0.62
HADHAP40939 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.94■□□□□ 0.62
HADHAP40939 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HADHAP40939 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
HADHAP40939 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.94■□□□□ 0.62
HADHAP40939 AC135050.7-201ENST00000624508 2218 ntBASIC18.94■□□□□ 0.62
HADHAP40939 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.94■□□□□ 0.62
HADHAP40939 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HADHAP40939 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
HADHAP40939 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HADHAP40939 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.94■□□□□ 0.62
HADHAP40939 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HADHAP40939 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.93■□□□□ 0.62
HADHAP40939 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
HADHAP40939 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.93■□□□□ 0.62
HADHAP40939 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HADHAP40939 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HADHAP40939 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HADHAP40939 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.93■□□□□ 0.62
HADHAP40939 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HADHAP40939 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HADHAP40939 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.93■□□□□ 0.62
HADHAP40939 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HADHAP40939 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.93■□□□□ 0.62
HADHAP40939 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.93■□□□□ 0.62
HADHAP40939 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.93■□□□□ 0.62
HADHAP40939 MIR4497-201ENST00000583208 89 ntBASIC18.93■□□□□ 0.62
HADHAP40939 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.93■□□□□ 0.62
HADHAP40939 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HADHAP40939 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
HADHAP40939 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HADHAP40939 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HADHAP40939 ANO7L1-203ENST00000602586 1720 ntBASIC18.93■□□□□ 0.62
HADHAP40939 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HADHAP40939 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
HADHAP40939 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
HADHAP40939 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.93■□□□□ 0.62
HADHAP40939 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
HADHAP40939 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
HADHAP40939 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.93■□□□□ 0.62
HADHAP40939 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
HADHAP40939 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HADHAP40939 KRT8P3-201ENST00000519669 1449 ntBASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms