Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
CEACAM3P40198 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CEACAM3P40198 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CEACAM3P40198 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC15.28■□□□□ 0.04
CEACAM3P40198 TSPY15P-201ENST00000457163 923 ntBASIC15.28■□□□□ 0.04
CEACAM3P40198 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC15.28■□□□□ 0.04
CEACAM3P40198 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC15.28■□□□□ 0.04
CEACAM3P40198 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CEACAM3P40198 AL353719.1-201ENST00000566847 864 ntBASIC15.28■□□□□ 0.04
CEACAM3P40198 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC15.28■□□□□ 0.04
CEACAM3P40198 GPX4-207ENST00000589115 812 ntTSL 2 BASIC15.28■□□□□ 0.04
CEACAM3P40198 BX323043.1-201ENST00000641006 1765 ntBASIC15.28■□□□□ 0.04
CEACAM3P40198 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CEACAM3P40198 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CEACAM3P40198 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CEACAM3P40198 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CEACAM3P40198 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC15.28■□□□□ 0.04
CEACAM3P40198 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CEACAM3P40198 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CEACAM3P40198 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC15.27■□□□□ 0.04
CEACAM3P40198 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC15.27■□□□□ 0.04
CEACAM3P40198 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CEACAM3P40198 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC15.27■□□□□ 0.04
CEACAM3P40198 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CEACAM3P40198 LINC01568-207ENST00000641790 1380 ntBASIC15.27■□□□□ 0.04
CEACAM3P40198 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
CEACAM3P40198 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
CEACAM3P40198 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
CEACAM3P40198 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC15.27■□□□□ 0.04
CEACAM3P40198 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
CEACAM3P40198 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CEACAM3P40198 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CEACAM3P40198 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC15.27■□□□□ 0.04
CEACAM3P40198 CRAT-202ENST00000393384 973 ntTSL 2 BASIC15.27■□□□□ 0.04
CEACAM3P40198 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC15.27■□□□□ 0.04
CEACAM3P40198 AC087499.1-201ENST00000418141 1075 ntBASIC15.27■□□□□ 0.04
CEACAM3P40198 GXYLT1P6-201ENST00000456472 1187 ntBASIC15.27■□□□□ 0.04
CEACAM3P40198 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC15.27■□□□□ 0.04
CEACAM3P40198 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC15.27■□□□□ 0.04
CEACAM3P40198 AC083906.6-201ENST00000641366 219 ntBASIC15.27■□□□□ 0.04
CEACAM3P40198 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CEACAM3P40198 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
CEACAM3P40198 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CEACAM3P40198 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CEACAM3P40198 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC15.27■□□□□ 0.03
CEACAM3P40198 AL512353.2-201ENST00000448759 1962 ntBASIC15.27■□□□□ 0.03
CEACAM3P40198 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC15.27■□□□□ 0.03
CEACAM3P40198 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
CEACAM3P40198 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CEACAM3P40198 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CEACAM3P40198 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CEACAM3P40198 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CEACAM3P40198 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
CEACAM3P40198 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CEACAM3P40198 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CEACAM3P40198 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CEACAM3P40198 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CEACAM3P40198 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CEACAM3P40198 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC15.26■□□□□ 0.03
CEACAM3P40198 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CEACAM3P40198 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CEACAM3P40198 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CEACAM3P40198 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC15.26■□□□□ 0.03
CEACAM3P40198 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CEACAM3P40198 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CEACAM3P40198 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CEACAM3P40198 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CEACAM3P40198 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC15.26■□□□□ 0.03
CEACAM3P40198 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CEACAM3P40198 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CEACAM3P40198 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CEACAM3P40198 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CEACAM3P40198 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CEACAM3P40198 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC15.26■□□□□ 0.03
CEACAM3P40198 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CEACAM3P40198 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC15.26■□□□□ 0.03
CEACAM3P40198 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC15.26■□□□□ 0.03
CEACAM3P40198 PHB2-202ENST00000440277 996 ntTSL 5 BASIC15.26■□□□□ 0.03
CEACAM3P40198 MCCD1P1-208ENST00000445732 328 ntBASIC15.26■□□□□ 0.03
CEACAM3P40198 RPS20-210ENST00000523936 899 ntTSL 2 BASIC15.26■□□□□ 0.03
CEACAM3P40198 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC15.26■□□□□ 0.03
CEACAM3P40198 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC15.26■□□□□ 0.03
CEACAM3P40198 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CEACAM3P40198 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC15.26■□□□□ 0.03
CEACAM3P40198 AL023803.3-201ENST00000615559 522 ntBASIC15.26■□□□□ 0.03
CEACAM3P40198 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CEACAM3P40198 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CEACAM3P40198 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CEACAM3P40198 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CEACAM3P40198 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC15.26■□□□□ 0.03
CEACAM3P40198 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CEACAM3P40198 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CEACAM3P40198 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC15.26■□□□□ 0.03
CEACAM3P40198 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CEACAM3P40198 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CEACAM3P40198 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
CEACAM3P40198 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CEACAM3P40198 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CEACAM3P40198 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CEACAM3P40198 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms