Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 KRT17P2-201ENST00000300992 1314 ntBASIC19.1■□□□□ 0.65
PTPN3P26045 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTPN3P26045 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.1■□□□□ 0.65
PTPN3P26045 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.1■□□□□ 0.65
PTPN3P26045 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
PTPN3P26045 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.1■□□□□ 0.65
PTPN3P26045 FITM1-202ENST00000559294 800 ntBASIC19.1■□□□□ 0.65
PTPN3P26045 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTPN3P26045 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.1■□□□□ 0.65
PTPN3P26045 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PTPN3P26045 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.1■□□□□ 0.65
PTPN3P26045 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTPN3P26045 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTPN3P26045 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTPN3P26045 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
PTPN3P26045 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTPN3P26045 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PTPN3P26045 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PTPN3P26045 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
PTPN3P26045 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.1■□□□□ 0.65
PTPN3P26045 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.1■□□□□ 0.65
PTPN3P26045 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTPN3P26045 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTPN3P26045 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTPN3P26045 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTPN3P26045 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.09■□□□□ 0.65
PTPN3P26045 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.09■□□□□ 0.65
PTPN3P26045 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
PTPN3P26045 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.09■□□□□ 0.65
PTPN3P26045 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PTPN3P26045 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTPN3P26045 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTPN3P26045 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PTPN3P26045 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PTPN3P26045 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTPN3P26045 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.09■□□□□ 0.65
PTPN3P26045 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.09■□□□□ 0.65
PTPN3P26045 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.09■□□□□ 0.65
PTPN3P26045 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.09■□□□□ 0.65
PTPN3P26045 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PTPN3P26045 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PTPN3P26045 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.09■□□□□ 0.65
PTPN3P26045 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.09■□□□□ 0.65
PTPN3P26045 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
PTPN3P26045 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTPN3P26045 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTPN3P26045 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTPN3P26045 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PTPN3P26045 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PTPN3P26045 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PTPN3P26045 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PTPN3P26045 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PTPN3P26045 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.08■□□□□ 0.65
PTPN3P26045 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PTPN3P26045 TSPY15P-201ENST00000457163 923 ntBASIC19.08■□□□□ 0.64
PTPN3P26045 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
PTPN3P26045 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.08■□□□□ 0.64
PTPN3P26045 MIR4674-201ENST00000582457 87 ntBASIC19.08■□□□□ 0.64
PTPN3P26045 AL023803.3-201ENST00000615559 522 ntBASIC19.08■□□□□ 0.64
PTPN3P26045 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.08■□□□□ 0.64
PTPN3P26045 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.08■□□□□ 0.64
PTPN3P26045 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PTPN3P26045 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.08■□□□□ 0.64
PTPN3P26045 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PTPN3P26045 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PTPN3P26045 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PTPN3P26045 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PTPN3P26045 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PTPN3P26045 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTPN3P26045 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.07■□□□□ 0.64
PTPN3P26045 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PTPN3P26045 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTPN3P26045 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTPN3P26045 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTPN3P26045 MIR1238-201ENST00000408483 83 ntBASIC19.07■□□□□ 0.64
PTPN3P26045 MCCD1P1-208ENST00000445732 328 ntBASIC19.07■□□□□ 0.64
PTPN3P26045 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTPN3P26045 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.07■□□□□ 0.64
PTPN3P26045 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PTPN3P26045 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
PTPN3P26045 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
PTPN3P26045 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.07■□□□□ 0.64
PTPN3P26045 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTPN3P26045 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTPN3P26045 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTPN3P26045 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTPN3P26045 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.07■□□□□ 0.64
PTPN3P26045 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTPN3P26045 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PTPN3P26045 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTPN3P26045 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
PTPN3P26045 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.06■□□□□ 0.64
PTPN3P26045 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PTPN3P26045 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
PTPN3P26045 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTPN3P26045 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTPN3P26045 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTPN3P26045 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
PTPN3P26045 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.06■□□□□ 0.64
PTPN3P26045 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms