Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH3P22223 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.32■□□□□ 0.52
CDH3P22223 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CDH3P22223 AC010203.1-204ENST00000548782 407 ntBASIC18.32■□□□□ 0.52
CDH3P22223 AL023803.3-201ENST00000615559 522 ntBASIC18.32■□□□□ 0.52
CDH3P22223 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.32■□□□□ 0.52
CDH3P22223 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH3P22223 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDH3P22223 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
CDH3P22223 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH3P22223 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH3P22223 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH3P22223 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.32■□□□□ 0.52
CDH3P22223 AC093503.3-201ENST00000624917 2352 ntBASIC18.32■□□□□ 0.52
CDH3P22223 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH3P22223 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
CDH3P22223 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH3P22223 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH3P22223 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDH3P22223 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
CDH3P22223 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDH3P22223 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH3P22223 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CDH3P22223 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH3P22223 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH3P22223 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH3P22223 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH3P22223 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDH3P22223 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH3P22223 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.31■□□□□ 0.52
CDH3P22223 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.31■□□□□ 0.52
CDH3P22223 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.31■□□□□ 0.52
CDH3P22223 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
CDH3P22223 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.31■□□□□ 0.52
CDH3P22223 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.31■□□□□ 0.52
CDH3P22223 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH3P22223 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CDH3P22223 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH3P22223 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH3P22223 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.31■□□□□ 0.52
CDH3P22223 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CDH3P22223 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH3P22223 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CDH3P22223 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH3P22223 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH3P22223 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.31■□□□□ 0.52
CDH3P22223 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.31■□□□□ 0.52
CDH3P22223 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CDH3P22223 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH3P22223 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH3P22223 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.31■□□□□ 0.52
CDH3P22223 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.31■□□□□ 0.52
CDH3P22223 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.3■□□□□ 0.52
CDH3P22223 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.3■□□□□ 0.52
CDH3P22223 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDH3P22223 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH3P22223 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CDH3P22223 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDH3P22223 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CDH3P22223 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH3P22223 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CDH3P22223 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.3■□□□□ 0.52
CDH3P22223 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH3P22223 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH3P22223 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CDH3P22223 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.3■□□□□ 0.52
CDH3P22223 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CDH3P22223 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH3P22223 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CDH3P22223 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH3P22223 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CDH3P22223 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.3■□□□□ 0.52
CDH3P22223 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH3P22223 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH3P22223 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH3P22223 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH3P22223 AC090340.1-201ENST00000620778 4980 ntBASIC18.29■□□□□ 0.52
CDH3P22223 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH3P22223 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH3P22223 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH3P22223 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH3P22223 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH3P22223 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.29■□□□□ 0.52
CDH3P22223 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH3P22223 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDH3P22223 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH3P22223 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH3P22223 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH3P22223 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDH3P22223 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.29■□□□□ 0.52
CDH3P22223 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.29■□□□□ 0.52
CDH3P22223 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.29■□□□□ 0.52
CDH3P22223 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.29■□□□□ 0.52
CDH3P22223 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.29■□□□□ 0.52
CDH3P22223 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.29■□□□□ 0.52
CDH3P22223 AC010331.1-201ENST00000611423 582 ntBASIC18.29■□□□□ 0.52
CDH3P22223 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
CDH3P22223 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.29■□□□□ 0.52
CDH3P22223 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CDH3P22223 AC073508.3-201ENST00000619697 1419 ntBASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms