Protein–RNA interactions for Protein: P18085

ARF4, ADP-ribosylation factor 4, humanhuman

Predicted RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARF4P18085 FXN-203ENST00000396366 922 ntTSL 2 BASIC20.32■□□□□ 0.84
ARF4P18085 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
ARF4P18085 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC20.32■□□□□ 0.84
ARF4P18085 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC20.32■□□□□ 0.84
ARF4P18085 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ARF4P18085 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
ARF4P18085 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ARF4P18085 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ARF4P18085 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ARF4P18085 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.32■□□□□ 0.84
ARF4P18085 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ARF4P18085 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.32■□□□□ 0.84
ARF4P18085 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ARF4P18085 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ARF4P18085 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.32■□□□□ 0.84
ARF4P18085 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ARF4P18085 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ARF4P18085 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.31■□□□□ 0.84
ARF4P18085 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.31■□□□□ 0.84
ARF4P18085 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ARF4P18085 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC20.31■□□□□ 0.84
ARF4P18085 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ARF4P18085 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ARF4P18085 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ARF4P18085 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ARF4P18085 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ARF4P18085 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ARF4P18085 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.31■□□□□ 0.84
ARF4P18085 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.31■□□□□ 0.84
ARF4P18085 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.31■□□□□ 0.84
ARF4P18085 AC083906.6-201ENST00000641366 219 ntBASIC20.31■□□□□ 0.84
ARF4P18085 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ARF4P18085 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ARF4P18085 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ARF4P18085 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
ARF4P18085 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ARF4P18085 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ARF4P18085 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
ARF4P18085 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.3■□□□□ 0.84
ARF4P18085 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
ARF4P18085 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.3■□□□□ 0.84
ARF4P18085 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ARF4P18085 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ARF4P18085 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.3■□□□□ 0.84
ARF4P18085 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ARF4P18085 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ARF4P18085 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ARF4P18085 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ARF4P18085 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ARF4P18085 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ARF4P18085 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ARF4P18085 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ARF4P18085 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
ARF4P18085 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.3■□□□□ 0.84
ARF4P18085 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ARF4P18085 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ARF4P18085 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
ARF4P18085 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.3■□□□□ 0.84
ARF4P18085 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
ARF4P18085 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ARF4P18085 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ARF4P18085 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
ARF4P18085 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.29■□□□□ 0.84
ARF4P18085 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
ARF4P18085 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.29■□□□□ 0.84
ARF4P18085 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.29■□□□□ 0.84
ARF4P18085 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.29■□□□□ 0.84
ARF4P18085 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
ARF4P18085 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ARF4P18085 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC20.29■□□□□ 0.84
ARF4P18085 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ARF4P18085 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ARF4P18085 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.29■□□□□ 0.84
ARF4P18085 HLA-F-220ENST00000434407 884 ntBASIC20.29■□□□□ 0.84
ARF4P18085 NMU-205ENST00000511469 756 ntTSL 3 BASIC20.29■□□□□ 0.84
ARF4P18085 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ARF4P18085 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.29■□□□□ 0.84
ARF4P18085 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ARF4P18085 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
ARF4P18085 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC20.29■□□□□ 0.84
ARF4P18085 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ARF4P18085 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ARF4P18085 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ARF4P18085 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
ARF4P18085 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ARF4P18085 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ARF4P18085 AL391807.1-203ENST00000604392 2365 ntBASIC20.28■□□□□ 0.84
ARF4P18085 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ARF4P18085 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ARF4P18085 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC20.28■□□□□ 0.84
ARF4P18085 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ARF4P18085 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
ARF4P18085 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ARF4P18085 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
ARF4P18085 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ARF4P18085 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ARF4P18085 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.28■□□□□ 0.84
ARF4P18085 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ARF4P18085 CNP-204ENST00000472031 1019 ntTSL 2 BASIC20.28■□□□□ 0.84
ARF4P18085 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms