Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.33■□□□□ 0.36
PRKCAP17252 MIR4785-201ENST00000585005 73 ntBASIC17.33■□□□□ 0.36
PRKCAP17252 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PRKCAP17252 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.33■□□□□ 0.36
PRKCAP17252 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.33■□□□□ 0.36
PRKCAP17252 REXO1L10P-201ENST00000615707 1290 ntBASIC17.33■□□□□ 0.36
PRKCAP17252 REXO1L12P-201ENST00000622156 912 ntBASIC17.33■□□□□ 0.36
PRKCAP17252 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
PRKCAP17252 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PRKCAP17252 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
PRKCAP17252 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.33■□□□□ 0.36
PRKCAP17252 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.33■□□□□ 0.36
PRKCAP17252 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PRKCAP17252 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
PRKCAP17252 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PRKCAP17252 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
PRKCAP17252 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PRKCAP17252 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRKCAP17252 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRKCAP17252 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.32■□□□□ 0.36
PRKCAP17252 AL161938.1-201ENST00000569833 2180 ntBASIC17.32■□□□□ 0.36
PRKCAP17252 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PRKCAP17252 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRKCAP17252 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRKCAP17252 FP475955.4-201ENST00000623131 1990 ntBASIC17.32■□□□□ 0.36
PRKCAP17252 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PRKCAP17252 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRKCAP17252 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
PRKCAP17252 FAM207BP-201ENST00000447172 505 ntBASIC17.32■□□□□ 0.36
PRKCAP17252 PRSS44-201ENST00000515154 1146 ntBASIC17.32■□□□□ 0.36
PRKCAP17252 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.32■□□□□ 0.36
PRKCAP17252 AP003071.4-201ENST00000562276 1284 ntBASIC17.32■□□□□ 0.36
PRKCAP17252 MIR4497-201ENST00000583208 89 ntBASIC17.32■□□□□ 0.36
PRKCAP17252 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.32■□□□□ 0.36
PRKCAP17252 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PRKCAP17252 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PRKCAP17252 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRKCAP17252 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRKCAP17252 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRKCAP17252 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRKCAP17252 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
PRKCAP17252 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRKCAP17252 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.32■□□□□ 0.36
PRKCAP17252 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRKCAP17252 AC139713.2-201ENST00000641328 2723 ntBASIC17.32■□□□□ 0.36
PRKCAP17252 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
PRKCAP17252 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRKCAP17252 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.32■□□□□ 0.36
PRKCAP17252 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRKCAP17252 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRKCAP17252 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRKCAP17252 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRKCAP17252 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.31■□□□□ 0.36
PRKCAP17252 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
PRKCAP17252 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRKCAP17252 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRKCAP17252 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRKCAP17252 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRKCAP17252 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PRKCAP17252 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRKCAP17252 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
PRKCAP17252 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRKCAP17252 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRKCAP17252 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRKCAP17252 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.31■□□□□ 0.36
PRKCAP17252 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PRKCAP17252 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRKCAP17252 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRKCAP17252 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.31■□□□□ 0.36
PRKCAP17252 FEM1AP3-201ENST00000403722 1741 ntBASIC17.31■□□□□ 0.36
PRKCAP17252 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRKCAP17252 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PRKCAP17252 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PRKCAP17252 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.31■□□□□ 0.36
PRKCAP17252 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
PRKCAP17252 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.31■□□□□ 0.36
PRKCAP17252 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRKCAP17252 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PRKCAP17252 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
PRKCAP17252 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
PRKCAP17252 AP000692.2-201ENST00000608391 879 ntBASIC17.31■□□□□ 0.36
PRKCAP17252 DGCR10-201ENST00000609839 495 ntBASIC17.31■□□□□ 0.36
PRKCAP17252 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.31■□□□□ 0.36
PRKCAP17252 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.31■□□□□ 0.36
PRKCAP17252 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRKCAP17252 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.31■□□□□ 0.36
PRKCAP17252 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.31■□□□□ 0.36
PRKCAP17252 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRKCAP17252 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRKCAP17252 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.31■□□□□ 0.36
PRKCAP17252 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRKCAP17252 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
PRKCAP17252 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRKCAP17252 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PRKCAP17252 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRKCAP17252 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.3■□□□□ 0.36
PRKCAP17252 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PRKCAP17252 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRKCAP17252 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.3■□□□□ 0.36
PRKCAP17252 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms