| MUC1 | P15941 | COQ10B-201 | ENST00000263960 | 2239 nt | APPRIS P1 TSL 1 (best) BASIC | 16.04 | ■□□□□ 0.16 | | |
| MUC1 | P15941 | PGAP3-206 | ENST00000579146 | 2220 nt | TSL 2 BASIC | 16.04 | ■□□□□ 0.16 | | |
| MUC1 | P15941 | DCLK2-207 | ENST00000635524 | 2153 nt | APPRIS ALT2 TSL 5 BASIC | 16.04 | ■□□□□ 0.16 | | |
| MUC1 | P15941 | GAL3ST4-204 | ENST00000423751 | 1695 nt | TSL 3 BASIC | 16.04 | ■□□□□ 0.16 | | |
| MUC1 | P15941 | LTBP3-202 | ENST00000322147 | 4046 nt | APPRIS P3 TSL 1 (best) BASIC | 16.04 | ■□□□□ 0.16 | | |
| MUC1 | P15941 | PDLIM3-201 | ENST00000284767 | 2589 nt | TSL 5 BASIC | 16.04 | ■□□□□ 0.16 | | |
| MUC1 | P15941 | DOK7-201 | ENST00000340083 | 2562 nt | APPRIS P1 TSL 1 (best) BASIC | 16.04 | ■□□□□ 0.16 | | |
| MUC1 | P15941 | DOK7-203 | ENST00000507039 | 2551 nt | TSL 2 BASIC | 16.04 | ■□□□□ 0.16 | | |
| MUC1 | P15941 | BAIAP2-204 | ENST00000428708 | 2095 nt | APPRIS ALT2 TSL 1 (best) BASIC | 16.04 | ■□□□□ 0.16 | | |
| MUC1 | P15941 | UBXN2A-201 | ENST00000309033 | 6066 nt | APPRIS P1 TSL 1 (best) BASIC | 16.04 | ■□□□□ 0.16 | | |
| MUC1 | P15941 | CHD1L-204 | ENST00000431239 | 2907 nt | TSL 5 BASIC | 16.04 | ■□□□□ 0.16 | | |
| MUC1 | P15941 | SNX19-209 | ENST00000530356 | 1562 nt | TSL 2 BASIC | 16.04 | ■□□□□ 0.16 | | |
| MUC1 | P15941 | MPZ-206 | ENST00000533357 | 1955 nt | APPRIS P1 TSL 1 (best) BASIC | 16.04 | ■□□□□ 0.16 | | |
| MUC1 | P15941 | ULK3-217 | ENST00000568667 | 1470 nt | TSL 5 BASIC | 16.03 | ■□□□□ 0.16 | | |
| MUC1 | P15941 | ANGPTL4-201 | ENST00000301455 | 1879 nt | APPRIS P1 TSL 1 (best) BASIC | 16.03 | ■□□□□ 0.16 | | |
| MUC1 | P15941 | RTEL1-204 | ENST00000370003 | 2273 nt | TSL 2 BASIC | 16.03 | ■□□□□ 0.16 | | |
| MUC1 | P15941 | AC022916.1-201 | ENST00000590478 | 2658 nt | TSL 2 BASIC | 16.03 | ■□□□□ 0.16 | | |
| MUC1 | P15941 | TRAK2-202 | ENST00000430254 | 1436 nt | TSL 2 BASIC | 16.03 | ■□□□□ 0.16 | | |
| MUC1 | P15941 | SMIM4-203 | ENST00000477703 | 1770 nt | APPRIS P1 TSL 1 (best) BASIC | 16.03 | ■□□□□ 0.16 | | |
| MUC1 | P15941 | ANKRD9-201 | ENST00000286918 | 6727 nt | APPRIS P1 TSL 1 (best) BASIC | 16.03 | ■□□□□ 0.16 | | |
| MUC1 | P15941 | ISM2-207 | ENST00000493585 | 1739 nt | TSL 1 (best) BASIC | 16.03 | ■□□□□ 0.16 | | |
| MUC1 | P15941 | IRF7-203 | ENST00000397566 | 2051 nt | APPRIS P4 TSL 1 (best) BASIC | 16.03 | ■□□□□ 0.16 | | |
| MUC1 | P15941 | PTPA-201 | ENST00000337738 | 2845 nt | TSL 2 BASIC | 16.03 | ■□□□□ 0.16 | | |
| MUC1 | P15941 | ST3GAL4-205 | ENST00000449406 | 1669 nt | TSL 5 BASIC | 16.03 | ■□□□□ 0.16 | | |
| MUC1 | P15941 | TCF4-201 | ENST00000354452 | 3482 nt | APPRIS ALT1 TSL 5 BASIC | 16.03 | ■□□□□ 0.16 | | |
| MUC1 | P15941 | KIAA1522-201 | ENST00000294521 | 878 nt | APPRIS ALT2 TSL 2 BASIC | 16.03 | ■□□□□ 0.16 | | |
| MUC1 | P15941 | C9orf129-201 | ENST00000375419 | 1154 nt | APPRIS P1 TSL 5 BASIC | 16.03 | ■□□□□ 0.16 | | |
| MUC1 | P15941 | CCDC107-202 | ENST00000378406 | 1016 nt | APPRIS ALT2 TSL 2 BASIC | 16.03 | ■□□□□ 0.16 | | |
| MUC1 | P15941 | HDAC11-203 | ENST00000402271 | 1018 nt | TSL 3 BASIC | 16.03 | ■□□□□ 0.16 | | |
| MUC1 | P15941 | MESTP1-201 | ENST00000404287 | 994 nt | BASIC | 16.03 | ■□□□□ 0.16 | | |
| MUC1 | P15941 | PSMB5-205 | ENST00000493471 | 1117 nt | TSL 1 (best) BASIC | 16.03 | ■□□□□ 0.16 | | |
| MUC1 | P15941 | FAM98C-205 | ENST00000588262 | 826 nt | TSL 1 (best) BASIC | 16.03 | ■□□□□ 0.16 | | |
| MUC1 | P15941 | SERGEF-201 | ENST00000265965 | 1566 nt | APPRIS P1 TSL 1 (best) BASIC | 16.03 | ■□□□□ 0.16 | | |
| MUC1 | P15941 | PLEKHG5-201 | ENST00000340850 | 4715 nt | APPRIS P3 TSL 5 BASIC | 16.03 | ■□□□□ 0.16 | | |
| MUC1 | P15941 | RGL3-202 | ENST00000393423 | 2278 nt | TSL 1 (best) BASIC | 16.03 | ■□□□□ 0.16 | | |
| MUC1 | P15941 | PLEKHG5-211 | ENST00000535355 | 4725 nt | APPRIS ALT2 TSL 2 BASIC | 16.03 | ■□□□□ 0.16 | | |
| MUC1 | P15941 | GAREM2-201 | ENST00000401533 | 4161 nt | APPRIS P1 TSL 1 (best) BASIC | 16.03 | ■□□□□ 0.16 | | |
| MUC1 | P15941 | RTN4-207 | ENST00000402434 | 1456 nt | TSL 5 BASIC | 16.03 | ■□□□□ 0.16 | | |
| MUC1 | P15941 | OTOP2-201 | ENST00000331427 | 2147 nt | APPRIS P1 TSL 5 BASIC | 16.03 | ■□□□□ 0.16 | | |
| MUC1 | P15941 | ADAP1-217 | ENST00000611167 | 2118 nt | TSL 5 BASIC | 16.03 | ■□□□□ 0.16 | | |
| MUC1 | P15941 | C6orf223-202 | ENST00000439969 | 2757 nt | TSL 2 BASIC | 16.03 | ■□□□□ 0.16 | | |
| MUC1 | P15941 | MAFG-201 | ENST00000357736 | 5040 nt | APPRIS P1 TSL 1 (best) BASIC | 16.03 | ■□□□□ 0.16 | | |
| MUC1 | P15941 | NRN1-204 | ENST00000622188 | 1795 nt | TSL 2 BASIC | 16.03 | ■□□□□ 0.16 | | |
| MUC1 | P15941 | UBTF-202 | ENST00000343638 | 4684 nt | TSL 1 (best) BASIC | 16.03 | ■□□□□ 0.16 | | |
| MUC1 | P15941 | NUBP2-201 | ENST00000262302 | 1413 nt | APPRIS P1 TSL 1 (best) BASIC | 16.02 | ■□□□□ 0.16 | | |
| MUC1 | P15941 | ETS1-208 | ENST00000535549 | 4594 nt | TSL 1 (best) BASIC | 16.02 | ■□□□□ 0.16 | | |
| MUC1 | P15941 | RRS1-201 | ENST00000320270 | 1706 nt | APPRIS P1 BASIC | 16.02 | ■□□□□ 0.16 | | |
| MUC1 | P15941 | HEXDC-201 | ENST00000327949 | 1733 nt | APPRIS P1 TSL 1 (best) BASIC | 16.02 | ■□□□□ 0.16 | | |
| MUC1 | P15941 | LRCH3-207 | ENST00000441090 | 2034 nt | TSL 2 BASIC | 16.02 | ■□□□□ 0.16 | | |
| MUC1 | P15941 | ILDR2-203 | ENST00000469934 | 1950 nt | APPRIS ALT2 TSL 5 BASIC | 16.02 | ■□□□□ 0.16 | | |
| MUC1 | P15941 | ANKS3-202 | ENST00000446014 | 2265 nt | TSL 5 BASIC | 16.02 | ■□□□□ 0.16 | | |
| MUC1 | P15941 | C19orf54-203 | ENST00000470681 | 2521 nt | TSL 2 BASIC | 16.02 | ■□□□□ 0.16 | | |
| MUC1 | P15941 | TES-201 | ENST00000358204 | 2782 nt | APPRIS P1 TSL 1 (best) BASIC | 16.02 | ■□□□□ 0.16 | | |
| MUC1 | P15941 | NFATC1-210 | ENST00000587635 | 2195 nt | TSL 1 (best) BASIC | 16.02 | ■□□□□ 0.16 | | |
| MUC1 | P15941 | VPS37B-201 | ENST00000267202 | 3028 nt | APPRIS P1 TSL 1 (best) BASIC | 16.02 | ■□□□□ 0.16 | | |
| MUC1 | P15941 | RHBDL1-201 | ENST00000219551 | 1560 nt | TSL 1 (best) BASIC | 16.02 | ■□□□□ 0.16 | | |
| MUC1 | P15941 | UNC93B2-201 | ENST00000285383 | 730 nt | BASIC | 16.02 | ■□□□□ 0.16 | | |
| MUC1 | P15941 | PTMS-201 | ENST00000309083 | 1139 nt | APPRIS P1 TSL 1 (best) BASIC | 16.02 | ■□□□□ 0.16 | | |
| MUC1 | P15941 | TCTEX1D2-201 | ENST00000325318 | 673 nt | APPRIS P1 TSL 1 (best) BASIC | 16.02 | ■□□□□ 0.16 | | |
| MUC1 | P15941 | AC073343.2-203 | ENST00000366167 | 564 nt | TSL 4 BASIC | 16.02 | ■□□□□ 0.16 | | |
| MUC1 | P15941 | UBB-203 | ENST00000395839 | 1012 nt | APPRIS P1 TSL 2 BASIC | 16.02 | ■□□□□ 0.16 | | |
| MUC1 | P15941 | HDAC11-205 | ENST00000404548 | 577 nt | TSL 4 BASIC | 16.02 | ■□□□□ 0.16 | | |
| MUC1 | P15941 | PHF11-218 | ENST00000496623 | 1173 nt | APPRIS ALT2 TSL 2 BASIC | 16.02 | ■□□□□ 0.16 | | |
| MUC1 | P15941 | SIVA1-207 | ENST00000556195 | 674 nt | TSL 3 BASIC | 16.02 | ■□□□□ 0.16 | | |
| MUC1 | P15941 | TGIF1-222 | ENST00000577543 | 729 nt | TSL 3 BASIC | 16.02 | ■□□□□ 0.16 | | |
| MUC1 | P15941 | AC005943.1-201 | ENST00000585937 | 1002 nt | APPRIS P1 TSL 3 BASIC | 16.02 | ■□□□□ 0.16 | | |
| MUC1 | P15941 | FAM66C-209 | ENST00000544214 | 2623 nt | TSL 1 (best) BASIC | 16.02 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | BORCS6-201 | ENST00000389017 | 2575 nt | APPRIS P1 BASIC | 16.02 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | AEBP2-201 | ENST00000266508 | 3620 nt | APPRIS ALT2 TSL 1 (best) BASIC | 16.02 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | KANK3-201 | ENST00000330915 | 2787 nt | APPRIS P2 TSL 1 (best) BASIC | 16.02 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | PAX1-205 | ENST00000613128 | 5352 nt | APPRIS ALT2 TSL 1 (best) BASIC | 16.02 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | TEX21P-204 | ENST00000641479 | 1693 nt | BASIC | 16.02 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | EEF1A1-203 | ENST00000331523 | 1923 nt | APPRIS P1 TSL 5 BASIC | 16.02 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | SEMA6B-201 | ENST00000586582 | 3986 nt | APPRIS P2 TSL 1 (best) BASIC | 16.02 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | ANKRD18DP-201 | ENST00000335478 | 2171 nt | TSL 2 BASIC | 16.02 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | ATRN-201 | ENST00000262919 | 8633 nt | APPRIS P4 TSL 5 BASIC | 16.01 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | ZNF200-202 | ENST00000396870 | 2373 nt | APPRIS ALT2 TSL 1 (best) BASIC | 16.01 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | RBPMS-210 | ENST00000520191 | 1613 nt | TSL 1 (best) BASIC | 16.01 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | ZNF668-208 | ENST00000538906 | 2865 nt | APPRIS P1 TSL 2 BASIC | 16.01 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | RANBP10-201 | ENST00000317506 | 5341 nt | APPRIS P2 TSL 1 (best) BASIC | 16.01 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | RANBP10-209 | ENST00000630626 | 5305 nt | APPRIS ALT2 TSL 5 BASIC | 16.01 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | LINC01356-201 | ENST00000401018 | 1819 nt | TSL 2 BASIC | 16.01 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | PITPNC1-201 | ENST00000299954 | 6359 nt | APPRIS ALT2 TSL 5 BASIC | 16.01 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | INPP5J-207 | ENST00000405300 | 2515 nt | TSL 1 (best) BASIC | 16.01 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | FAM234A-203 | ENST00000399932 | 3213 nt | APPRIS P1 TSL 1 (best) BASIC | 16.01 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | PRR5-ARHGAP8-201 | ENST00000352766 | 2043 nt | APPRIS P1 TSL 2 BASIC | 16.01 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | YBX3-201 | ENST00000228251 | 1796 nt | APPRIS P3 TSL 1 (best) BASIC | 16.01 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | IMMP2L-202 | ENST00000405709 | 1522 nt | APPRIS P1 TSL 1 (best) BASIC | 16.01 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | PSMD8-210 | ENST00000620216 | 1538 nt | APPRIS P1 TSL 1 (best) BASIC | 16.01 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | TJP3-205 | ENST00000587686 | 2946 nt | APPRIS ALT2 TSL 1 (best) BASIC | 16.01 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | APP-202 | ENST00000348990 | 3355 nt | TSL 1 (best) BASIC | 16.01 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | CXADR-204 | ENST00000400166 | 1080 nt | TSL 1 (best) BASIC | 16.01 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | AL162231.1-203 | ENST00000416454 | 465 nt | APPRIS ALT2 TSL 2 BASIC | 16.01 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | AL357874.1-201 | ENST00000428948 | 574 nt | TSL 1 (best) BASIC | 16.01 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | TSPY23P-201 | ENST00000440136 | 739 nt | BASIC | 16.01 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | DBNL-214 | ENST00000456905 | 1241 nt | TSL 2 BASIC | 16.01 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | GCFC2-207 | ENST00000470503 | 1066 nt | TSL 1 (best) BASIC | 16.01 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | ASPHD1-203 | ENST00000483405 | 1115 nt | APPRIS ALT2 TSL 3 BASIC | 16.01 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | ROPN1L-202 | ENST00000503804 | 1291 nt | APPRIS P1 TSL 2 BASIC | 16.01 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | AC004803.1-203 | ENST00000539259 | 501 nt | TSL 2 BASIC | 16.01 | ■□□□□ 0.15 | | |