Protein–RNA interactions for Protein: P13073

COX4I1, Cytochrome c oxidase subunit 4 isoform 1, mitochondrial, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1P13073 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COX4I1P13073 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.05■□□□□ 0.48
COX4I1P13073 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.05■□□□□ 0.48
COX4I1P13073 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COX4I1P13073 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COX4I1P13073 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COX4I1P13073 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COX4I1P13073 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COX4I1P13073 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COX4I1P13073 AC009053.2-201ENST00000563701 2365 ntBASIC18.04■□□□□ 0.48
COX4I1P13073 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.04■□□□□ 0.48
COX4I1P13073 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
COX4I1P13073 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
COX4I1P13073 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
COX4I1P13073 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.04■□□□□ 0.48
COX4I1P13073 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
COX4I1P13073 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COX4I1P13073 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
COX4I1P13073 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.04■□□□□ 0.48
COX4I1P13073 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.04■□□□□ 0.48
COX4I1P13073 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.04■□□□□ 0.48
COX4I1P13073 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.04■□□□□ 0.48
COX4I1P13073 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.04■□□□□ 0.48
COX4I1P13073 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
COX4I1P13073 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
COX4I1P13073 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.04■□□□□ 0.48
COX4I1P13073 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
COX4I1P13073 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
COX4I1P13073 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
COX4I1P13073 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.04■□□□□ 0.48
COX4I1P13073 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COX4I1P13073 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
COX4I1P13073 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
COX4I1P13073 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
COX4I1P13073 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
COX4I1P13073 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COX4I1P13073 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
COX4I1P13073 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
COX4I1P13073 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
COX4I1P13073 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COX4I1P13073 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.03■□□□□ 0.48
COX4I1P13073 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
COX4I1P13073 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COX4I1P13073 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.03■□□□□ 0.48
COX4I1P13073 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
COX4I1P13073 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COX4I1P13073 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.03■□□□□ 0.48
COX4I1P13073 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COX4I1P13073 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
COX4I1P13073 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COX4I1P13073 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.03■□□□□ 0.48
COX4I1P13073 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.03■□□□□ 0.48
COX4I1P13073 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.03■□□□□ 0.48
COX4I1P13073 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.03■□□□□ 0.48
COX4I1P13073 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.03■□□□□ 0.48
COX4I1P13073 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COX4I1P13073 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.03■□□□□ 0.48
COX4I1P13073 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.03■□□□□ 0.48
COX4I1P13073 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.03■□□□□ 0.48
COX4I1P13073 AC068587.9-201ENST00000641814 219 ntBASIC18.03■□□□□ 0.48
COX4I1P13073 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COX4I1P13073 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.03■□□□□ 0.48
COX4I1P13073 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.03■□□□□ 0.48
COX4I1P13073 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
COX4I1P13073 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
COX4I1P13073 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COX4I1P13073 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
COX4I1P13073 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
COX4I1P13073 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
COX4I1P13073 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COX4I1P13073 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.03■□□□□ 0.48
COX4I1P13073 AC099398.1-201ENST00000567919 2776 ntBASIC18.02■□□□□ 0.48
COX4I1P13073 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
COX4I1P13073 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COX4I1P13073 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.02■□□□□ 0.48
COX4I1P13073 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
COX4I1P13073 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
COX4I1P13073 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.02■□□□□ 0.48
COX4I1P13073 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.02■□□□□ 0.48
COX4I1P13073 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
COX4I1P13073 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
COX4I1P13073 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
COX4I1P13073 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.02■□□□□ 0.48
COX4I1P13073 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
COX4I1P13073 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.02■□□□□ 0.48
COX4I1P13073 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COX4I1P13073 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.02■□□□□ 0.48
COX4I1P13073 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.02■□□□□ 0.48
COX4I1P13073 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.02■□□□□ 0.48
COX4I1P13073 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.02■□□□□ 0.48
COX4I1P13073 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.02■□□□□ 0.48
COX4I1P13073 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.02■□□□□ 0.48
COX4I1P13073 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.02■□□□□ 0.48
COX4I1P13073 MYC-208ENST00000641036 567 ntBASIC18.02■□□□□ 0.48
COX4I1P13073 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COX4I1P13073 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
COX4I1P13073 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.02■□□□□ 0.47
COX4I1P13073 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
COX4I1P13073 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
COX4I1P13073 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.02■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms