Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD28P10747 HBZP1-201ENST00000354915 429 ntBASIC14.63□□□□□ -0.07
CD28P10747 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD28P10747 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC14.63□□□□□ -0.07
CD28P10747 SPDYE13P-201ENST00000445314 798 ntBASIC14.63□□□□□ -0.07
CD28P10747 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC14.63□□□□□ -0.07
CD28P10747 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC14.63□□□□□ -0.07
CD28P10747 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC14.63□□□□□ -0.07
CD28P10747 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC14.63□□□□□ -0.07
CD28P10747 KRT126P-201ENST00000549467 1181 ntBASIC14.63□□□□□ -0.07
CD28P10747 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC14.63□□□□□ -0.07
CD28P10747 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC14.63□□□□□ -0.07
CD28P10747 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CD28P10747 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC14.63□□□□□ -0.07
CD28P10747 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD28P10747 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD28P10747 KRT8P3-201ENST00000519669 1449 ntBASIC14.63□□□□□ -0.07
CD28P10747 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
CD28P10747 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD28P10747 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CD28P10747 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CD28P10747 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CD28P10747 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC14.63□□□□□ -0.07
CD28P10747 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD28P10747 TREX1-205ENST00000625293 1783 ntBASIC14.62□□□□□ -0.07
CD28P10747 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
CD28P10747 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC14.62□□□□□ -0.07
CD28P10747 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD28P10747 BCL2-203ENST00000589955 5011 ntBASIC14.62□□□□□ -0.07
CD28P10747 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD28P10747 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC14.62□□□□□ -0.07
CD28P10747 TP73-202ENST00000354437 2140 ntTSL 5 BASIC14.62□□□□□ -0.07
CD28P10747 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD28P10747 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD28P10747 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD28P10747 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD28P10747 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC14.62□□□□□ -0.07
CD28P10747 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD28P10747 GRAMD4P1-201ENST00000435181 1110 ntBASIC14.62□□□□□ -0.07
CD28P10747 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC14.62□□□□□ -0.07
CD28P10747 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CD28P10747 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC14.62□□□□□ -0.07
CD28P10747 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC14.62□□□□□ -0.07
CD28P10747 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC14.62□□□□□ -0.07
CD28P10747 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD28P10747 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC14.62□□□□□ -0.07
CD28P10747 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC14.62□□□□□ -0.07
CD28P10747 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CD28P10747 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC14.62□□□□□ -0.07
CD28P10747 AL121894.2-201ENST00000602977 491 ntBASIC14.62□□□□□ -0.07
CD28P10747 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC14.62□□□□□ -0.07
CD28P10747 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD28P10747 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD28P10747 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD28P10747 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD28P10747 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC14.62□□□□□ -0.07
CD28P10747 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD28P10747 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD28P10747 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD28P10747 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC14.62□□□□□ -0.07
CD28P10747 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD28P10747 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CD28P10747 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
CD28P10747 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD28P10747 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC14.61□□□□□ -0.07
CD28P10747 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD28P10747 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CD28P10747 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD28P10747 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CD28P10747 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC14.61□□□□□ -0.07
CD28P10747 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD28P10747 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD28P10747 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC14.61□□□□□ -0.07
CD28P10747 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD28P10747 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD28P10747 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CD28P10747 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CD28P10747 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC14.61□□□□□ -0.07
CD28P10747 AL645929.1-201ENST00000420084 975 ntBASIC14.61□□□□□ -0.07
CD28P10747 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC14.61□□□□□ -0.07
CD28P10747 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CD28P10747 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD28P10747 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD28P10747 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC14.61□□□□□ -0.07
CD28P10747 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
CD28P10747 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC14.61□□□□□ -0.07
CD28P10747 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC14.61□□□□□ -0.07
CD28P10747 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC14.61□□□□□ -0.07
CD28P10747 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD28P10747 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC14.61□□□□□ -0.07
CD28P10747 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CD28P10747 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD28P10747 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD28P10747 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC14.61□□□□□ -0.07
CD28P10747 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD28P10747 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD28P10747 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CD28P10747 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD28P10747 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CD28P10747 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms