Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC14.85□□□□□ -0.03
PF4V1P10720 WWOX-216ENST00000569818 525 ntBASIC14.85□□□□□ -0.03
PF4V1P10720 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PF4V1P10720 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC14.85□□□□□ -0.03
PF4V1P10720 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC14.85□□□□□ -0.03
PF4V1P10720 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
PF4V1P10720 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC14.85□□□□□ -0.03
PF4V1P10720 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PF4V1P10720 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PF4V1P10720 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PF4V1P10720 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PF4V1P10720 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PF4V1P10720 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC14.85□□□□□ -0.03
PF4V1P10720 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
PF4V1P10720 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PF4V1P10720 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
PF4V1P10720 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PF4V1P10720 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
PF4V1P10720 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PF4V1P10720 AC005332.7-201ENST00000614046 2005 ntBASIC14.85□□□□□ -0.03
PF4V1P10720 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
PF4V1P10720 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PF4V1P10720 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PF4V1P10720 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PF4V1P10720 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PF4V1P10720 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
PF4V1P10720 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
PF4V1P10720 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC14.84□□□□□ -0.03
PF4V1P10720 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PF4V1P10720 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PF4V1P10720 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
PF4V1P10720 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC14.84□□□□□ -0.03
PF4V1P10720 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PF4V1P10720 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC14.84□□□□□ -0.03
PF4V1P10720 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
PF4V1P10720 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PF4V1P10720 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC14.84□□□□□ -0.03
PF4V1P10720 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PF4V1P10720 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
PF4V1P10720 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PF4V1P10720 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PF4V1P10720 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
PF4V1P10720 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PF4V1P10720 GXYLT1P6-201ENST00000456472 1187 ntBASIC14.84□□□□□ -0.03
PF4V1P10720 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
PF4V1P10720 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
PF4V1P10720 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC14.84□□□□□ -0.03
PF4V1P10720 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PF4V1P10720 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC14.84□□□□□ -0.03
PF4V1P10720 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC14.84□□□□□ -0.03
PF4V1P10720 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PF4V1P10720 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC14.84□□□□□ -0.03
PF4V1P10720 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PF4V1P10720 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC14.84□□□□□ -0.03
PF4V1P10720 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PF4V1P10720 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PF4V1P10720 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
PF4V1P10720 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PF4V1P10720 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PF4V1P10720 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC14.84□□□□□ -0.03
PF4V1P10720 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PF4V1P10720 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
PF4V1P10720 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PF4V1P10720 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PF4V1P10720 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC14.83□□□□□ -0.03
PF4V1P10720 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC14.83□□□□□ -0.03
PF4V1P10720 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
PF4V1P10720 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
PF4V1P10720 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
PF4V1P10720 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PF4V1P10720 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
PF4V1P10720 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PF4V1P10720 ANKRD20A18P-201ENST00000359341 492 ntBASIC14.83□□□□□ -0.04
PF4V1P10720 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PF4V1P10720 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC14.83□□□□□ -0.04
PF4V1P10720 AC007663.1-201ENST00000438948 1240 ntBASIC14.83□□□□□ -0.04
PF4V1P10720 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC14.83□□□□□ -0.04
PF4V1P10720 COX11P1-201ENST00000489116 835 ntBASIC14.83□□□□□ -0.04
PF4V1P10720 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
PF4V1P10720 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC14.83□□□□□ -0.04
PF4V1P10720 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC14.83□□□□□ -0.04
PF4V1P10720 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PF4V1P10720 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PF4V1P10720 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PF4V1P10720 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC14.83□□□□□ -0.04
PF4V1P10720 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PF4V1P10720 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
PF4V1P10720 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
PF4V1P10720 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC14.83□□□□□ -0.04
PF4V1P10720 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PF4V1P10720 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PF4V1P10720 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PF4V1P10720 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
PF4V1P10720 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PF4V1P10720 IRX1P1-201ENST00000438849 1838 ntBASIC14.82□□□□□ -0.04
PF4V1P10720 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PF4V1P10720 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC14.82□□□□□ -0.04
PF4V1P10720 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PF4V1P10720 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PF4V1P10720 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms