Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCNYL3P0C7X3 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CCNYL3P0C7X3 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCNYL3P0C7X3 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.06■□□□□ 0.48
CCNYL3P0C7X3 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCNYL3P0C7X3 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCNYL3P0C7X3 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.06■□□□□ 0.48
CCNYL3P0C7X3 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.06■□□□□ 0.48
CCNYL3P0C7X3 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.06■□□□□ 0.48
CCNYL3P0C7X3 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.06■□□□□ 0.48
CCNYL3P0C7X3 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.06■□□□□ 0.48
CCNYL3P0C7X3 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.06■□□□□ 0.48
CCNYL3P0C7X3 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCNYL3P0C7X3 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.06■□□□□ 0.48
CCNYL3P0C7X3 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCNYL3P0C7X3 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCNYL3P0C7X3 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CCNYL3P0C7X3 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCNYL3P0C7X3 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCNYL3P0C7X3 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCNYL3P0C7X3 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCNYL3P0C7X3 KRT8P11-201ENST00000409686 1436 ntBASIC18.06■□□□□ 0.48
CCNYL3P0C7X3 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCNYL3P0C7X3 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCNYL3P0C7X3 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CCNYL3P0C7X3 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCNYL3P0C7X3 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCNYL3P0C7X3 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCNYL3P0C7X3 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.05■□□□□ 0.48
CCNYL3P0C7X3 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
CCNYL3P0C7X3 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCNYL3P0C7X3 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCNYL3P0C7X3 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCNYL3P0C7X3 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCNYL3P0C7X3 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCNYL3P0C7X3 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCNYL3P0C7X3 AL031133.1-201ENST00000406807 723 ntBASIC18.05■□□□□ 0.48
CCNYL3P0C7X3 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCNYL3P0C7X3 UPK3BP1-201ENST00000428678 509 ntBASIC18.05■□□□□ 0.48
CCNYL3P0C7X3 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.05■□□□□ 0.48
CCNYL3P0C7X3 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.05■□□□□ 0.48
CCNYL3P0C7X3 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.05■□□□□ 0.48
CCNYL3P0C7X3 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.05■□□□□ 0.48
CCNYL3P0C7X3 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.05■□□□□ 0.48
CCNYL3P0C7X3 AL358472.4-201ENST00000633140 710 ntBASIC18.05■□□□□ 0.48
CCNYL3P0C7X3 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCNYL3P0C7X3 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCNYL3P0C7X3 AL032819.2-201ENST00000624543 2162 ntBASIC18.05■□□□□ 0.48
CCNYL3P0C7X3 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCNYL3P0C7X3 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCNYL3P0C7X3 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CCNYL3P0C7X3 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.05■□□□□ 0.48
CCNYL3P0C7X3 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.05■□□□□ 0.48
CCNYL3P0C7X3 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCNYL3P0C7X3 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.05■□□□□ 0.48
CCNYL3P0C7X3 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCNYL3P0C7X3 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCNYL3P0C7X3 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCNYL3P0C7X3 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCNYL3P0C7X3 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCNYL3P0C7X3 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCNYL3P0C7X3 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCNYL3P0C7X3 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CCNYL3P0C7X3 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCNYL3P0C7X3 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCNYL3P0C7X3 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.04■□□□□ 0.48
CCNYL3P0C7X3 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCNYL3P0C7X3 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCNYL3P0C7X3 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.04■□□□□ 0.48
CCNYL3P0C7X3 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCNYL3P0C7X3 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.04■□□□□ 0.48
CCNYL3P0C7X3 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCNYL3P0C7X3 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.04■□□□□ 0.48
CCNYL3P0C7X3 MYC-208ENST00000641036 567 ntBASIC18.04■□□□□ 0.48
CCNYL3P0C7X3 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCNYL3P0C7X3 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.04■□□□□ 0.48
CCNYL3P0C7X3 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CCNYL3P0C7X3 AC090340.1-201ENST00000620778 4980 ntBASIC18.04■□□□□ 0.48
CCNYL3P0C7X3 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCNYL3P0C7X3 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
CCNYL3P0C7X3 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CCNYL3P0C7X3 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCNYL3P0C7X3 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCNYL3P0C7X3 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCNYL3P0C7X3 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.03■□□□□ 0.48
CCNYL3P0C7X3 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCNYL3P0C7X3 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.03■□□□□ 0.48
CCNYL3P0C7X3 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.03■□□□□ 0.48
CCNYL3P0C7X3 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.03■□□□□ 0.48
CCNYL3P0C7X3 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.03■□□□□ 0.48
CCNYL3P0C7X3 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCNYL3P0C7X3 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.03■□□□□ 0.48
CCNYL3P0C7X3 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.03■□□□□ 0.48
CCNYL3P0C7X3 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCNYL3P0C7X3 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.03■□□□□ 0.48
CCNYL3P0C7X3 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCNYL3P0C7X3 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.03■□□□□ 0.48
CCNYL3P0C7X3 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.03■□□□□ 0.48
CCNYL3P0C7X3 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CCNYL3P0C7X3 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms