Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CSF1P09603 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CSF1P09603 OR2A1-AS1-201ENST00000462305 773 ntBASIC16.19■□□□□ 0.18
CSF1P09603 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC16.19■□□□□ 0.18
CSF1P09603 AC026366.1-201ENST00000488803 879 ntBASIC16.19■□□□□ 0.18
CSF1P09603 UNC93B4-201ENST00000505679 747 ntBASIC16.19■□□□□ 0.18
CSF1P09603 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
CSF1P09603 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC16.19■□□□□ 0.18
CSF1P09603 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC16.19■□□□□ 0.18
CSF1P09603 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CSF1P09603 MMD2-204ENST00000612910 778 ntTSL 5 BASIC16.19■□□□□ 0.18
CSF1P09603 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CSF1P09603 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CSF1P09603 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.19■□□□□ 0.18
CSF1P09603 ESPNP-201ENST00000270691 2015 ntBASIC16.19■□□□□ 0.18
CSF1P09603 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CSF1P09603 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CSF1P09603 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CSF1P09603 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CSF1P09603 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CSF1P09603 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CSF1P09603 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CSF1P09603 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.18■□□□□ 0.18
CSF1P09603 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CSF1P09603 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.18■□□□□ 0.18
CSF1P09603 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
CSF1P09603 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CSF1P09603 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.18■□□□□ 0.18
CSF1P09603 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CSF1P09603 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CSF1P09603 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
CSF1P09603 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CSF1P09603 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CSF1P09603 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CSF1P09603 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CSF1P09603 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC16.18■□□□□ 0.18
CSF1P09603 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.18■□□□□ 0.18
CSF1P09603 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC16.18■□□□□ 0.18
CSF1P09603 AP003097.1-201ENST00000530657 1135 ntBASIC16.18■□□□□ 0.18
CSF1P09603 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC16.18■□□□□ 0.18
CSF1P09603 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC16.18■□□□□ 0.18
CSF1P09603 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CSF1P09603 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CSF1P09603 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CSF1P09603 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CSF1P09603 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CSF1P09603 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CSF1P09603 GNAS-203ENST00000306120 1878 ntBASIC16.18■□□□□ 0.18
CSF1P09603 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CSF1P09603 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CSF1P09603 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CSF1P09603 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CSF1P09603 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.18■□□□□ 0.18
CSF1P09603 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.18■□□□□ 0.18
CSF1P09603 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CSF1P09603 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.18■□□□□ 0.18
CSF1P09603 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CSF1P09603 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CSF1P09603 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CSF1P09603 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CSF1P09603 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CSF1P09603 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CSF1P09603 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CSF1P09603 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CSF1P09603 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC16.17■□□□□ 0.18
CSF1P09603 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CSF1P09603 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.17■□□□□ 0.18
CSF1P09603 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CSF1P09603 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CSF1P09603 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CSF1P09603 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CSF1P09603 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CSF1P09603 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.17■□□□□ 0.18
CSF1P09603 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CSF1P09603 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CSF1P09603 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CSF1P09603 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CSF1P09603 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.17■□□□□ 0.18
CSF1P09603 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.17■□□□□ 0.18
CSF1P09603 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC16.17■□□□□ 0.18
CSF1P09603 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CSF1P09603 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC16.17■□□□□ 0.18
CSF1P09603 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC16.17■□□□□ 0.18
CSF1P09603 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CSF1P09603 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC16.17■□□□□ 0.18
CSF1P09603 UNC93B5-201ENST00000530315 699 ntBASIC16.17■□□□□ 0.18
CSF1P09603 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC16.17■□□□□ 0.18
CSF1P09603 C2orf69P4-201ENST00000565394 541 ntBASIC16.17■□□□□ 0.18
CSF1P09603 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC16.17■□□□□ 0.18
CSF1P09603 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CSF1P09603 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
CSF1P09603 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CSF1P09603 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CSF1P09603 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.17■□□□□ 0.18
CSF1P09603 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
CSF1P09603 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC16.17■□□□□ 0.18
CSF1P09603 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.17■□□□□ 0.18
CSF1P09603 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.17■□□□□ 0.18
CSF1P09603 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.17■□□□□ 0.18
CSF1P09603 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms