Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
COL1A2P08123 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL1A2P08123 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.51■□□□□ 0.87
COL1A2P08123 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL1A2P08123 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
COL1A2P08123 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.51■□□□□ 0.87
COL1A2P08123 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL1A2P08123 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
COL1A2P08123 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.51■□□□□ 0.87
COL1A2P08123 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL1A2P08123 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COL1A2P08123 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL1A2P08123 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL1A2P08123 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL1A2P08123 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL1A2P08123 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
COL1A2P08123 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC20.5■□□□□ 0.87
COL1A2P08123 IPPK-202ENST00000375522 882 ntTSL 3 BASIC20.5■□□□□ 0.87
COL1A2P08123 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
COL1A2P08123 CHCHD2P8-201ENST00000429873 447 ntBASIC20.5■□□□□ 0.87
COL1A2P08123 DUSP5P1-201ENST00000441325 1139 ntBASIC20.5■□□□□ 0.87
COL1A2P08123 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COL1A2P08123 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.5■□□□□ 0.87
COL1A2P08123 RNF126P1-202ENST00000569893 925 ntBASIC20.5■□□□□ 0.87
COL1A2P08123 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
COL1A2P08123 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
COL1A2P08123 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL1A2P08123 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.5■□□□□ 0.87
COL1A2P08123 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COL1A2P08123 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
COL1A2P08123 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COL1A2P08123 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.5■□□□□ 0.87
COL1A2P08123 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL1A2P08123 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COL1A2P08123 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COL1A2P08123 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL1A2P08123 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.49■□□□□ 0.87
COL1A2P08123 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL1A2P08123 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
COL1A2P08123 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL1A2P08123 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
COL1A2P08123 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC20.49■□□□□ 0.87
COL1A2P08123 TSPY22P-201ENST00000427496 604 ntBASIC20.49■□□□□ 0.87
COL1A2P08123 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.49■□□□□ 0.87
COL1A2P08123 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC20.49■□□□□ 0.87
COL1A2P08123 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
COL1A2P08123 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.49■□□□□ 0.87
COL1A2P08123 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.49■□□□□ 0.87
COL1A2P08123 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
COL1A2P08123 CLEC4GP1-201ENST00000596555 870 ntBASIC20.49■□□□□ 0.87
COL1A2P08123 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC20.49■□□□□ 0.87
COL1A2P08123 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
COL1A2P08123 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL1A2P08123 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL1A2P08123 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.49■□□□□ 0.87
COL1A2P08123 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL1A2P08123 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL1A2P08123 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL1A2P08123 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL1A2P08123 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL1A2P08123 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL1A2P08123 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
COL1A2P08123 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
COL1A2P08123 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL1A2P08123 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
COL1A2P08123 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL1A2P08123 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
COL1A2P08123 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL1A2P08123 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC20.48■□□□□ 0.87
COL1A2P08123 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL1A2P08123 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL1A2P08123 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
COL1A2P08123 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
COL1A2P08123 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC20.48■□□□□ 0.87
COL1A2P08123 AP002383.4-201ENST00000442518 975 ntBASIC20.48■□□□□ 0.87
COL1A2P08123 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC20.48■□□□□ 0.87
COL1A2P08123 KRT126P-201ENST00000549467 1181 ntBASIC20.48■□□□□ 0.87
COL1A2P08123 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.48■□□□□ 0.87
COL1A2P08123 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC20.48■□□□□ 0.87
COL1A2P08123 MIR3180-1-201ENST00000580374 94 ntBASIC20.48■□□□□ 0.87
COL1A2P08123 MIR3180-3-201ENST00000584616 94 ntBASIC20.48■□□□□ 0.87
COL1A2P08123 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.48■□□□□ 0.87
COL1A2P08123 AC092119.3-201ENST00000612618 583 ntBASIC20.48■□□□□ 0.87
COL1A2P08123 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
COL1A2P08123 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC20.48■□□□□ 0.87
COL1A2P08123 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
COL1A2P08123 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
COL1A2P08123 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.48■□□□□ 0.87
COL1A2P08123 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC20.48■□□□□ 0.87
COL1A2P08123 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL1A2P08123 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL1A2P08123 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
COL1A2P08123 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
COL1A2P08123 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL1A2P08123 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
COL1A2P08123 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL1A2P08123 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL1A2P08123 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL1A2P08123 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC20.47■□□□□ 0.87
COL1A2P08123 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms