Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
RHOP08100 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RHOP08100 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19.39■□□□□ 0.69
RHOP08100 KRT17P6-201ENST00000453795 1220 ntBASIC19.39■□□□□ 0.69
RHOP08100 AC090616.6-201ENST00000582640 721 ntBASIC19.39■□□□□ 0.69
RHOP08100 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.39■□□□□ 0.69
RHOP08100 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.39■□□□□ 0.69
RHOP08100 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.39■□□□□ 0.69
RHOP08100 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.39■□□□□ 0.69
RHOP08100 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RHOP08100 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
RHOP08100 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RHOP08100 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
RHOP08100 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RHOP08100 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
RHOP08100 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RHOP08100 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
RHOP08100 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.38■□□□□ 0.69
RHOP08100 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RHOP08100 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.38■□□□□ 0.69
RHOP08100 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RHOP08100 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.38■□□□□ 0.69
RHOP08100 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RHOP08100 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RHOP08100 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RHOP08100 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.38■□□□□ 0.69
RHOP08100 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.38■□□□□ 0.69
RHOP08100 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RHOP08100 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
RHOP08100 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RHOP08100 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RHOP08100 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.38■□□□□ 0.69
RHOP08100 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.38■□□□□ 0.69
RHOP08100 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RHOP08100 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.38■□□□□ 0.69
RHOP08100 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.38■□□□□ 0.69
RHOP08100 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RHOP08100 FOSL1P1-201ENST00000511041 816 ntBASIC19.38■□□□□ 0.69
RHOP08100 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RHOP08100 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.38■□□□□ 0.69
RHOP08100 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RHOP08100 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.38■□□□□ 0.69
RHOP08100 AC091304.2-201ENST00000564639 760 ntBASIC19.38■□□□□ 0.69
RHOP08100 AL121772.3-201ENST00000610840 674 ntBASIC19.38■□□□□ 0.69
RHOP08100 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.38■□□□□ 0.69
RHOP08100 IGHV3-41-201ENST00000613121 348 ntBASIC19.38■□□□□ 0.69
RHOP08100 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.38■□□□□ 0.69
RHOP08100 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RHOP08100 AC068587.9-201ENST00000641814 219 ntBASIC19.38■□□□□ 0.69
RHOP08100 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RHOP08100 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.37■□□□□ 0.69
RHOP08100 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RHOP08100 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RHOP08100 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.37■□□□□ 0.69
RHOP08100 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.37■□□□□ 0.69
RHOP08100 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RHOP08100 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RHOP08100 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RHOP08100 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RHOP08100 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.37■□□□□ 0.69
RHOP08100 KRT8P10-201ENST00000450021 1447 ntBASIC19.37■□□□□ 0.69
RHOP08100 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
RHOP08100 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RHOP08100 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RHOP08100 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RHOP08100 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC19.37■□□□□ 0.69
RHOP08100 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC19.37■□□□□ 0.69
RHOP08100 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.37■□□□□ 0.69
RHOP08100 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.37■□□□□ 0.69
RHOP08100 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RHOP08100 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
RHOP08100 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RHOP08100 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RHOP08100 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RHOP08100 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RHOP08100 AL158211.5-201ENST00000623583 2518 ntBASIC19.36■□□□□ 0.69
RHOP08100 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RHOP08100 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RHOP08100 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.36■□□□□ 0.69
RHOP08100 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.36■□□□□ 0.69
RHOP08100 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.36■□□□□ 0.69
RHOP08100 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RHOP08100 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RHOP08100 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.36■□□□□ 0.69
RHOP08100 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
RHOP08100 EMBP1-201ENST00000458200 901 ntBASIC19.36■□□□□ 0.69
RHOP08100 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.36■□□□□ 0.69
RHOP08100 GPR32P1-201ENST00000601788 811 ntBASIC19.36■□□□□ 0.69
RHOP08100 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC19.36■□□□□ 0.69
RHOP08100 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RHOP08100 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RHOP08100 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RHOP08100 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RHOP08100 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
RHOP08100 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RHOP08100 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RHOP08100 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
RHOP08100 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
RHOP08100 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RHOP08100 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms