Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.97■□□□□ 0.63
HLA-DQB2P05538 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
HLA-DQB2P05538 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.97■□□□□ 0.63
HLA-DQB2P05538 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DQB2P05538 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DQB2P05538 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
HLA-DQB2P05538 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.97■□□□□ 0.63
HLA-DQB2P05538 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DQB2P05538 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.97■□□□□ 0.63
HLA-DQB2P05538 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DQB2P05538 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.97■□□□□ 0.63
HLA-DQB2P05538 AC073912.3-201ENST00000624414 853 ntBASIC18.97■□□□□ 0.63
HLA-DQB2P05538 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.97■□□□□ 0.63
HLA-DQB2P05538 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DQB2P05538 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DQB2P05538 KRT8P45-201ENST00000414328 1447 ntBASIC18.97■□□□□ 0.63
HLA-DQB2P05538 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.97■□□□□ 0.63
HLA-DQB2P05538 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DQB2P05538 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.97■□□□□ 0.63
HLA-DQB2P05538 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DQB2P05538 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DQB2P05538 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
HLA-DQB2P05538 AC126763.1-201ENST00000552015 2118 ntBASIC18.97■□□□□ 0.63
HLA-DQB2P05538 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
HLA-DQB2P05538 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.97■□□□□ 0.63
HLA-DQB2P05538 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-DQB2P05538 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.96■□□□□ 0.63
HLA-DQB2P05538 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.96■□□□□ 0.63
HLA-DQB2P05538 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-DQB2P05538 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.96■□□□□ 0.63
HLA-DQB2P05538 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.96■□□□□ 0.63
HLA-DQB2P05538 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.96■□□□□ 0.63
HLA-DQB2P05538 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-DQB2P05538 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.96■□□□□ 0.63
HLA-DQB2P05538 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-DQB2P05538 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.96■□□□□ 0.63
HLA-DQB2P05538 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-DQB2P05538 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
HLA-DQB2P05538 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.96■□□□□ 0.63
HLA-DQB2P05538 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.96■□□□□ 0.63
HLA-DQB2P05538 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.96■□□□□ 0.63
HLA-DQB2P05538 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.96■□□□□ 0.63
HLA-DQB2P05538 AC145285.6-201ENST00000604632 637 ntBASIC18.96■□□□□ 0.63
HLA-DQB2P05538 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-DQB2P05538 AC005082.1-201ENST00000413042 2259 ntBASIC18.96■□□□□ 0.63
HLA-DQB2P05538 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-DQB2P05538 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
HLA-DQB2P05538 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-DQB2P05538 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-DQB2P05538 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-DQB2P05538 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-DQB2P05538 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
HLA-DQB2P05538 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.95■□□□□ 0.62
HLA-DQB2P05538 AC104581.1-202ENST00000635932 2618 ntBASIC18.95■□□□□ 0.62
HLA-DQB2P05538 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-DQB2P05538 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
HLA-DQB2P05538 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-DQB2P05538 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-DQB2P05538 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-DQB2P05538 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.95■□□□□ 0.62
HLA-DQB2P05538 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.95■□□□□ 0.62
HLA-DQB2P05538 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
HLA-DQB2P05538 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.95■□□□□ 0.62
HLA-DQB2P05538 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-DQB2P05538 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.95■□□□□ 0.62
HLA-DQB2P05538 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.95■□□□□ 0.62
HLA-DQB2P05538 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-DQB2P05538 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-DQB2P05538 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.95■□□□□ 0.62
HLA-DQB2P05538 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.95■□□□□ 0.62
HLA-DQB2P05538 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.95■□□□□ 0.62
HLA-DQB2P05538 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-DQB2P05538 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.95■□□□□ 0.62
HLA-DQB2P05538 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-DQB2P05538 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.95■□□□□ 0.62
HLA-DQB2P05538 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.95■□□□□ 0.62
HLA-DQB2P05538 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-DQB2P05538 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-DQB2P05538 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
HLA-DQB2P05538 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-DQB2P05538 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-DQB2P05538 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.94■□□□□ 0.62
HLA-DQB2P05538 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-DQB2P05538 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-DQB2P05538 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-DQB2P05538 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-DQB2P05538 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-DQB2P05538 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-DQB2P05538 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-DQB2P05538 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-DQB2P05538 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
HLA-DQB2P05538 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-DQB2P05538 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.94■□□□□ 0.62
HLA-DQB2P05538 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.94■□□□□ 0.62
HLA-DQB2P05538 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.94■□□□□ 0.62
HLA-DQB2P05538 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.94■□□□□ 0.62
HLA-DQB2P05538 WWOX-216ENST00000569818 525 ntBASIC18.94■□□□□ 0.62
HLA-DQB2P05538 AC133561.5-201ENST00000635547 218 ntBASIC18.94■□□□□ 0.62
HLA-DQB2P05538 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-DQB2P05538 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms