Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HMGCRP04035 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HMGCRP04035 AC112907.3-201ENST00000577781 2400 ntBASIC21.12■□□□□ 0.97
HMGCRP04035 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC21.11■□□□□ 0.97
HMGCRP04035 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HMGCRP04035 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HMGCRP04035 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.11■□□□□ 0.97
HMGCRP04035 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HMGCRP04035 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HMGCRP04035 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
HMGCRP04035 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HMGCRP04035 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HMGCRP04035 NSUN5P1-202ENST00000421140 1535 ntBASIC21.11■□□□□ 0.97
HMGCRP04035 NSUN5P2-203ENST00000457352 1529 ntBASIC21.11■□□□□ 0.97
HMGCRP04035 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HMGCRP04035 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
HMGCRP04035 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC21.11■□□□□ 0.97
HMGCRP04035 LSM5-204ENST00000409909 740 ntTSL 2 BASIC21.11■□□□□ 0.97
HMGCRP04035 NUS1P2-201ENST00000417358 873 ntBASIC21.11■□□□□ 0.97
HMGCRP04035 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC21.11■□□□□ 0.97
HMGCRP04035 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC21.11■□□□□ 0.97
HMGCRP04035 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
HMGCRP04035 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HMGCRP04035 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HMGCRP04035 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.11■□□□□ 0.97
HMGCRP04035 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC21.11■□□□□ 0.97
HMGCRP04035 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.11■□□□□ 0.97
HMGCRP04035 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
HMGCRP04035 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HMGCRP04035 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
HMGCRP04035 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
HMGCRP04035 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HMGCRP04035 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.1■□□□□ 0.97
HMGCRP04035 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.1■□□□□ 0.97
HMGCRP04035 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HMGCRP04035 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC21.1■□□□□ 0.97
HMGCRP04035 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
HMGCRP04035 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HMGCRP04035 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC21.1■□□□□ 0.97
HMGCRP04035 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HMGCRP04035 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC21.1■□□□□ 0.97
HMGCRP04035 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC21.1■□□□□ 0.97
HMGCRP04035 GUSBP12-201ENST00000513727 720 ntBASIC21.1■□□□□ 0.97
HMGCRP04035 MOK-208ENST00000519058 917 ntTSL 2 BASIC21.1■□□□□ 0.97
HMGCRP04035 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC21.1■□□□□ 0.97
HMGCRP04035 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
HMGCRP04035 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC21.1■□□□□ 0.97
HMGCRP04035 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
HMGCRP04035 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC21.1■□□□□ 0.97
HMGCRP04035 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HMGCRP04035 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
HMGCRP04035 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HMGCRP04035 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
HMGCRP04035 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
HMGCRP04035 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HMGCRP04035 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HMGCRP04035 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.09■□□□□ 0.97
HMGCRP04035 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HMGCRP04035 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HMGCRP04035 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HMGCRP04035 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
HMGCRP04035 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC21.09■□□□□ 0.97
HMGCRP04035 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HMGCRP04035 IGHGP-201ENST00000390555 1178 ntBASIC21.09■□□□□ 0.97
HMGCRP04035 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC21.09■□□□□ 0.97
HMGCRP04035 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC21.09■□□□□ 0.97
HMGCRP04035 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC21.09■□□□□ 0.97
HMGCRP04035 SLC25A1P1-201ENST00000528351 927 ntBASIC21.09■□□□□ 0.97
HMGCRP04035 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HMGCRP04035 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC21.09■□□□□ 0.97
HMGCRP04035 IGHV3OR16-7-201ENST00000604106 360 ntBASIC21.09■□□□□ 0.97
HMGCRP04035 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC21.09■□□□□ 0.97
HMGCRP04035 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC21.09■□□□□ 0.97
HMGCRP04035 AC124864.1-201ENST00000623408 392 ntBASIC21.09■□□□□ 0.97
HMGCRP04035 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HMGCRP04035 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HMGCRP04035 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HMGCRP04035 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HMGCRP04035 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HMGCRP04035 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
HMGCRP04035 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.09■□□□□ 0.97
HMGCRP04035 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.09■□□□□ 0.97
HMGCRP04035 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
HMGCRP04035 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.09■□□□□ 0.97
HMGCRP04035 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HMGCRP04035 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.08■□□□□ 0.97
HMGCRP04035 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
HMGCRP04035 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.08■□□□□ 0.97
HMGCRP04035 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
HMGCRP04035 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
HMGCRP04035 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HMGCRP04035 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
HMGCRP04035 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HMGCRP04035 RN7SL606P-201ENST00000472779 293 ntBASIC21.08■□□□□ 0.97
HMGCRP04035 KRT18P58-201ENST00000527480 1120 ntBASIC21.08■□□□□ 0.97
HMGCRP04035 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
HMGCRP04035 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC21.08■□□□□ 0.97
HMGCRP04035 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.08■□□□□ 0.96
HMGCRP04035 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
HMGCRP04035 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms