Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
OPN1SWP03999 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
OPN1SWP03999 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
OPN1SWP03999 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
OPN1SWP03999 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
OPN1SWP03999 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
OPN1SWP03999 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.51■□□□□ 0.39
OPN1SWP03999 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
OPN1SWP03999 AC239809.2-201ENST00000415381 517 ntBASIC17.51■□□□□ 0.39
OPN1SWP03999 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.51■□□□□ 0.39
OPN1SWP03999 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
OPN1SWP03999 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.51■□□□□ 0.39
OPN1SWP03999 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.51■□□□□ 0.39
OPN1SWP03999 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
OPN1SWP03999 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.51■□□□□ 0.39
OPN1SWP03999 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
OPN1SWP03999 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.51■□□□□ 0.39
OPN1SWP03999 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
OPN1SWP03999 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.51■□□□□ 0.39
OPN1SWP03999 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
OPN1SWP03999 AC068880.1-201ENST00000507289 2297 ntBASIC17.51■□□□□ 0.39
OPN1SWP03999 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
OPN1SWP03999 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
OPN1SWP03999 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.51■□□□□ 0.39
OPN1SWP03999 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
OPN1SWP03999 MTMR9LP-203ENST00000426597 1545 ntBASIC17.51■□□□□ 0.39
OPN1SWP03999 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
OPN1SWP03999 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
OPN1SWP03999 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.51■□□□□ 0.39
OPN1SWP03999 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
OPN1SWP03999 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
OPN1SWP03999 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
OPN1SWP03999 ABALON-201ENST00000629058 1903 ntBASIC17.51■□□□□ 0.39
OPN1SWP03999 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
OPN1SWP03999 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
OPN1SWP03999 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
OPN1SWP03999 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.5■□□□□ 0.39
OPN1SWP03999 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
OPN1SWP03999 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
OPN1SWP03999 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
OPN1SWP03999 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.5■□□□□ 0.39
OPN1SWP03999 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
OPN1SWP03999 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
OPN1SWP03999 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
OPN1SWP03999 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
OPN1SWP03999 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.5■□□□□ 0.39
OPN1SWP03999 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
OPN1SWP03999 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
OPN1SWP03999 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.5■□□□□ 0.39
OPN1SWP03999 AC026366.1-201ENST00000488803 879 ntBASIC17.5■□□□□ 0.39
OPN1SWP03999 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
OPN1SWP03999 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
OPN1SWP03999 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.5■□□□□ 0.39
OPN1SWP03999 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.5■□□□□ 0.39
OPN1SWP03999 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
OPN1SWP03999 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
OPN1SWP03999 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
OPN1SWP03999 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
OPN1SWP03999 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
OPN1SWP03999 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
OPN1SWP03999 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
OPN1SWP03999 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.5■□□□□ 0.39
OPN1SWP03999 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
OPN1SWP03999 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
OPN1SWP03999 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
OPN1SWP03999 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
OPN1SWP03999 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
OPN1SWP03999 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
OPN1SWP03999 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
OPN1SWP03999 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
OPN1SWP03999 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
OPN1SWP03999 KRT8P11-201ENST00000409686 1436 ntBASIC17.49■□□□□ 0.39
OPN1SWP03999 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.49■□□□□ 0.39
OPN1SWP03999 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
OPN1SWP03999 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.49■□□□□ 0.39
OPN1SWP03999 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
OPN1SWP03999 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
OPN1SWP03999 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
OPN1SWP03999 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
OPN1SWP03999 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
OPN1SWP03999 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
OPN1SWP03999 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
OPN1SWP03999 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
OPN1SWP03999 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.49■□□□□ 0.39
OPN1SWP03999 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
OPN1SWP03999 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.49■□□□□ 0.39
OPN1SWP03999 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.49■□□□□ 0.39
OPN1SWP03999 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
OPN1SWP03999 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
OPN1SWP03999 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
OPN1SWP03999 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.49■□□□□ 0.39
OPN1SWP03999 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
OPN1SWP03999 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
OPN1SWP03999 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
OPN1SWP03999 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
OPN1SWP03999 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.49■□□□□ 0.39
OPN1SWP03999 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
OPN1SWP03999 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.49■□□□□ 0.39
OPN1SWP03999 NOC2LP2-201ENST00000407594 1944 ntBASIC17.49■□□□□ 0.39
OPN1SWP03999 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms