Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC21.34■■□□□ 1.01
ALDH1A1P00352 DDT-206ENST00000430101 573 ntTSL 2 BASIC21.34■■□□□ 1.01
ALDH1A1P00352 IGHV3-22-201ENST00000520721 359 ntBASIC21.34■■□□□ 1.01
ALDH1A1P00352 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC21.34■■□□□ 1.01
ALDH1A1P00352 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC21.34■■□□□ 1.01
ALDH1A1P00352 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ALDH1A1P00352 AC010327.4-202ENST00000591484 748 ntBASIC21.34■■□□□ 1.01
ALDH1A1P00352 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC21.34■■□□□ 1.01
ALDH1A1P00352 MTDHP3-201ENST00000594186 672 ntBASIC21.34■■□□□ 1.01
ALDH1A1P00352 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC21.34■■□□□ 1.01
ALDH1A1P00352 AL356488.2-201ENST00000602755 427 ntBASIC21.34■■□□□ 1.01
ALDH1A1P00352 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC21.34■■□□□ 1.01
ALDH1A1P00352 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC21.34■■□□□ 1.01
ALDH1A1P00352 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.34■■□□□ 1.01
ALDH1A1P00352 AC026310.3-201ENST00000625186 2373 ntBASIC21.34■■□□□ 1.01
ALDH1A1P00352 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ALDH1A1P00352 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ALDH1A1P00352 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ALDH1A1P00352 AC006333.2-201ENST00000607957 2099 ntBASIC21.33■■□□□ 1.01
ALDH1A1P00352 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
ALDH1A1P00352 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ALDH1A1P00352 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
ALDH1A1P00352 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
ALDH1A1P00352 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ALDH1A1P00352 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ALDH1A1P00352 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
ALDH1A1P00352 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC21.33■■□□□ 1.01
ALDH1A1P00352 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC21.33■■□□□ 1.01
ALDH1A1P00352 IMP4-203ENST00000409935 958 ntTSL 5 BASIC21.33■■□□□ 1.01
ALDH1A1P00352 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
ALDH1A1P00352 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
ALDH1A1P00352 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ALDH1A1P00352 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
ALDH1A1P00352 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
ALDH1A1P00352 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1
ALDH1A1P00352 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
ALDH1A1P00352 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
ALDH1A1P00352 CYP51A1P1-201ENST00000492267 1507 ntBASIC21.33■■□□□ 1
ALDH1A1P00352 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.33■■□□□ 1
ALDH1A1P00352 TREX1-205ENST00000625293 1783 ntBASIC21.33■■□□□ 1
ALDH1A1P00352 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC21.32■■□□□ 1
ALDH1A1P00352 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC21.32■■□□□ 1
ALDH1A1P00352 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.32■■□□□ 1
ALDH1A1P00352 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC21.32■■□□□ 1
ALDH1A1P00352 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC21.32■■□□□ 1
ALDH1A1P00352 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
ALDH1A1P00352 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
ALDH1A1P00352 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC21.32■■□□□ 1
ALDH1A1P00352 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC21.32■■□□□ 1
ALDH1A1P00352 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC21.32■■□□□ 1
ALDH1A1P00352 NAT14-202ENST00000587400 416 ntTSL 5 BASIC21.32■■□□□ 1
ALDH1A1P00352 ANKRD20A8P-203ENST00000641373 517 ntBASIC21.32■■□□□ 1
ALDH1A1P00352 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC21.32■■□□□ 1
ALDH1A1P00352 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
ALDH1A1P00352 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ALDH1A1P00352 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC21.32■■□□□ 1
ALDH1A1P00352 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.32■■□□□ 1
ALDH1A1P00352 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC21.32■■□□□ 1
ALDH1A1P00352 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
ALDH1A1P00352 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC21.31■■□□□ 1
ALDH1A1P00352 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
ALDH1A1P00352 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC21.31■■□□□ 1
ALDH1A1P00352 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
ALDH1A1P00352 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ALDH1A1P00352 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
ALDH1A1P00352 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC21.31■■□□□ 1
ALDH1A1P00352 LBH-204ENST00000406087 559 ntTSL 4 BASIC21.31■■□□□ 1
ALDH1A1P00352 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ALDH1A1P00352 AC004967.1-201ENST00000453589 447 ntBASIC21.31■■□□□ 1
ALDH1A1P00352 NMU-202ENST00000505262 693 ntTSL 3 BASIC21.31■■□□□ 1
ALDH1A1P00352 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC21.31■■□□□ 1
ALDH1A1P00352 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC21.31■■□□□ 1
ALDH1A1P00352 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC21.31■■□□□ 1
ALDH1A1P00352 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC21.31■■□□□ 1
ALDH1A1P00352 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.31■■□□□ 1
ALDH1A1P00352 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ALDH1A1P00352 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.31■■□□□ 1
ALDH1A1P00352 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC21.3■■□□□ 1
ALDH1A1P00352 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ALDH1A1P00352 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ALDH1A1P00352 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.3■■□□□ 1
ALDH1A1P00352 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC21.3■■□□□ 1
ALDH1A1P00352 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC21.3■■□□□ 1
ALDH1A1P00352 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ALDH1A1P00352 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC21.3■■□□□ 1
ALDH1A1P00352 DHDH-204ENST00000523250 634 ntTSL 5 BASIC21.3■■□□□ 1
ALDH1A1P00352 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC21.3■■□□□ 1
ALDH1A1P00352 AC040169.1-201ENST00000565382 521 ntBASIC21.3■■□□□ 1
ALDH1A1P00352 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
ALDH1A1P00352 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC21.3■■□□□ 1
ALDH1A1P00352 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ALDH1A1P00352 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC21.3■■□□□ 1
ALDH1A1P00352 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.3■■□□□ 1
ALDH1A1P00352 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC21.29■■□□□ 1
ALDH1A1P00352 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.29■■□□□ 1
ALDH1A1P00352 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.29■■□□□ 1
ALDH1A1P00352 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
ALDH1A1P00352 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ALDH1A1P00352 CSF3-203ENST00000394148 622 ntTSL 3 BASIC21.29■■□□□ 1
ALDH1A1P00352 RCN1P2-201ENST00000398357 915 ntBASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms