Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 RNF126P1-202ENST00000569893 925 ntBASIC20.08■□□□□ 0.81
CSPG5O95196 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CSPG5O95196 WDR6-223ENST00000627177 207 ntTSL 2 BASIC20.08■□□□□ 0.81
CSPG5O95196 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CSPG5O95196 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.08■□□□□ 0.8
CSPG5O95196 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CSPG5O95196 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CSPG5O95196 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CSPG5O95196 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CSPG5O95196 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CSPG5O95196 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CSPG5O95196 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
CSPG5O95196 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CSPG5O95196 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CSPG5O95196 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
CSPG5O95196 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CSPG5O95196 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
CSPG5O95196 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
CSPG5O95196 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.07■□□□□ 0.8
CSPG5O95196 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CSPG5O95196 AC091304.2-201ENST00000564639 760 ntBASIC20.07■□□□□ 0.8
CSPG5O95196 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC20.07■□□□□ 0.8
CSPG5O95196 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CSPG5O95196 MIR3180-5-201ENST00000583743 153 ntBASIC20.07■□□□□ 0.8
CSPG5O95196 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CSPG5O95196 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CSPG5O95196 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CSPG5O95196 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CSPG5O95196 AC099778.1-201ENST00000568593 1911 ntBASIC20.07■□□□□ 0.8
CSPG5O95196 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.07■□□□□ 0.8
CSPG5O95196 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CSPG5O95196 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CSPG5O95196 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CSPG5O95196 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.07■□□□□ 0.8
CSPG5O95196 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.06■□□□□ 0.8
CSPG5O95196 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.06■□□□□ 0.8
CSPG5O95196 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CSPG5O95196 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CSPG5O95196 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CSPG5O95196 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CSPG5O95196 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CSPG5O95196 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CSPG5O95196 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CSPG5O95196 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CSPG5O95196 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CSPG5O95196 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
CSPG5O95196 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC20.06■□□□□ 0.8
CSPG5O95196 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.06■□□□□ 0.8
CSPG5O95196 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC20.06■□□□□ 0.8
CSPG5O95196 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CSPG5O95196 NAA38-203ENST00000575071 553 ntTSL 2 BASIC20.06■□□□□ 0.8
CSPG5O95196 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.06■□□□□ 0.8
CSPG5O95196 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CSPG5O95196 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.06■□□□□ 0.8
CSPG5O95196 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.06■□□□□ 0.8
CSPG5O95196 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CSPG5O95196 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.06■□□□□ 0.8
CSPG5O95196 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CSPG5O95196 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CSPG5O95196 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.05■□□□□ 0.8
CSPG5O95196 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.05■□□□□ 0.8
CSPG5O95196 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CSPG5O95196 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CSPG5O95196 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.05■□□□□ 0.8
CSPG5O95196 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CSPG5O95196 TPSP2-201ENST00000561760 610 ntBASIC20.05■□□□□ 0.8
CSPG5O95196 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
CSPG5O95196 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CSPG5O95196 AC023511.2-201ENST00000618803 211 ntBASIC20.05■□□□□ 0.8
CSPG5O95196 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CSPG5O95196 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CSPG5O95196 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CSPG5O95196 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.05■□□□□ 0.8
CSPG5O95196 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CSPG5O95196 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CSPG5O95196 AL391807.1-203ENST00000604392 2365 ntBASIC20.05■□□□□ 0.8
CSPG5O95196 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CSPG5O95196 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.04■□□□□ 0.8
CSPG5O95196 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CSPG5O95196 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.04■□□□□ 0.8
CSPG5O95196 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CSPG5O95196 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CSPG5O95196 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CSPG5O95196 LINC00167-201ENST00000530583 1419 ntBASIC20.04■□□□□ 0.8
CSPG5O95196 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CSPG5O95196 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC20.04■□□□□ 0.8
CSPG5O95196 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC20.04■□□□□ 0.8
CSPG5O95196 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CSPG5O95196 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC20.04■□□□□ 0.8
CSPG5O95196 TBCB-205ENST00000585746 875 ntTSL 3 BASIC20.04■□□□□ 0.8
CSPG5O95196 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.04■□□□□ 0.8
CSPG5O95196 GPALPP1-207ENST00000611650 899 ntBASIC20.04■□□□□ 0.8
CSPG5O95196 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC20.04■□□□□ 0.8
CSPG5O95196 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CSPG5O95196 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC20.04■□□□□ 0.8
CSPG5O95196 AC112497.1-201ENST00000624824 639 ntBASIC20.04■□□□□ 0.8
CSPG5O95196 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC20.04■□□□□ 0.8
CSPG5O95196 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
CSPG5O95196 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC20.04■□□□□ 0.8
CSPG5O95196 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms