Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC29.18■■■□□ 2.26
PCF11O94913 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
PCF11O94913 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC29.18■■■□□ 2.26
PCF11O94913 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC29.18■■■□□ 2.26
PCF11O94913 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
PCF11O94913 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
PCF11O94913 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC29.18■■■□□ 2.26
PCF11O94913 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC29.18■■■□□ 2.26
PCF11O94913 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC29.18■■■□□ 2.26
PCF11O94913 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
PCF11O94913 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC29.17■■■□□ 2.26
PCF11O94913 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
PCF11O94913 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC29.17■■■□□ 2.26
PCF11O94913 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC29.17■■■□□ 2.26
PCF11O94913 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
PCF11O94913 LINC00265-3P-201ENST00000447588 903 ntBASIC29.17■■■□□ 2.26
PCF11O94913 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC29.17■■■□□ 2.26
PCF11O94913 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC29.17■■■□□ 2.26
PCF11O94913 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC29.17■■■□□ 2.26
PCF11O94913 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC29.16■■■□□ 2.26
PCF11O94913 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC29.16■■■□□ 2.26
PCF11O94913 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC29.16■■■□□ 2.26
PCF11O94913 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC29.16■■■□□ 2.26
PCF11O94913 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC29.16■■■□□ 2.26
PCF11O94913 AC073130.3-201ENST00000624389 2278 ntBASIC29.16■■■□□ 2.26
PCF11O94913 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
PCF11O94913 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC29.16■■■□□ 2.26
PCF11O94913 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
PCF11O94913 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
PCF11O94913 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
PCF11O94913 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC29.15■■■□□ 2.26
PCF11O94913 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
PCF11O94913 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC29.15■■■□□ 2.26
PCF11O94913 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC29.15■■■□□ 2.26
PCF11O94913 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC29.15■■■□□ 2.26
PCF11O94913 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC29.15■■■□□ 2.26
PCF11O94913 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC29.15■■■□□ 2.26
PCF11O94913 KRT18P1-202ENST00000452408 1331 ntBASIC29.15■■■□□ 2.26
PCF11O94913 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
PCF11O94913 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
PCF11O94913 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC29.15■■■□□ 2.26
PCF11O94913 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC29.15■■■□□ 2.26
PCF11O94913 IGHGP-201ENST00000390555 1178 ntBASIC29.14■■■□□ 2.26
PCF11O94913 UNC93B7-201ENST00000509439 705 ntBASIC29.14■■■□□ 2.26
PCF11O94913 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC29.14■■■□□ 2.26
PCF11O94913 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC29.14■■■□□ 2.26
PCF11O94913 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
PCF11O94913 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
PCF11O94913 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC29.14■■■□□ 2.26
PCF11O94913 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC29.14■■■□□ 2.26
PCF11O94913 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC29.14■■■□□ 2.26
PCF11O94913 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
PCF11O94913 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC29.14■■■□□ 2.26
PCF11O94913 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
PCF11O94913 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC29.14■■■□□ 2.26
PCF11O94913 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC29.14■■■□□ 2.25
PCF11O94913 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC29.14■■■□□ 2.25
PCF11O94913 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
PCF11O94913 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC29.13■■■□□ 2.25
PCF11O94913 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC29.13■■■□□ 2.25
PCF11O94913 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC29.13■■■□□ 2.25
PCF11O94913 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC29.13■■■□□ 2.25
PCF11O94913 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC29.13■■■□□ 2.25
PCF11O94913 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
PCF11O94913 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
PCF11O94913 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC29.13■■■□□ 2.25
PCF11O94913 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
PCF11O94913 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
PCF11O94913 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
PCF11O94913 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC29.13■■■□□ 2.25
PCF11O94913 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC29.13■■■□□ 2.25
PCF11O94913 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
PCF11O94913 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC29.13■■■□□ 2.25
PCF11O94913 AL357033.4-201ENST00000617703 1807 ntBASIC29.13■■■□□ 2.25
PCF11O94913 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC29.13■■■□□ 2.25
PCF11O94913 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC29.13■■■□□ 2.25
PCF11O94913 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
PCF11O94913 LINC00167-201ENST00000530583 1419 ntBASIC29.12■■■□□ 2.25
PCF11O94913 AC007952.6-201ENST00000573168 2673 ntBASIC29.12■■■□□ 2.25
PCF11O94913 AC003957.1-201ENST00000625108 2673 ntBASIC29.12■■■□□ 2.25
PCF11O94913 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
PCF11O94913 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
PCF11O94913 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC29.12■■■□□ 2.25
PCF11O94913 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
PCF11O94913 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC29.12■■■□□ 2.25
PCF11O94913 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
PCF11O94913 AP003733.1-201ENST00000491725 852 ntBASIC29.12■■■□□ 2.25
PCF11O94913 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC29.12■■■□□ 2.25
PCF11O94913 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC29.12■■■□□ 2.25
PCF11O94913 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC29.12■■■□□ 2.25
PCF11O94913 AL031008.1-201ENST00000619963 541 ntBASIC29.12■■■□□ 2.25
PCF11O94913 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC29.12■■■□□ 2.25
PCF11O94913 AC083906.6-201ENST00000641366 219 ntBASIC29.12■■■□□ 2.25
PCF11O94913 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
PCF11O94913 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC29.12■■■□□ 2.25
PCF11O94913 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
PCF11O94913 AP005901.3-202ENST00000581653 237 ntBASIC29.11■■■□□ 2.25
PCF11O94913 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
PCF11O94913 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC29.11■■■□□ 2.25
PCF11O94913 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms