Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GFRA3O60609 AC245100.3-201ENST00000441281 285 ntBASIC18.16■□□□□ 0.5
GFRA3O60609 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC18.16■□□□□ 0.5
GFRA3O60609 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC18.16■□□□□ 0.5
GFRA3O60609 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.16■□□□□ 0.5
GFRA3O60609 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.16■□□□□ 0.5
GFRA3O60609 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.16■□□□□ 0.5
GFRA3O60609 SERF2-217ENST00000630046 862 ntTSL 5 BASIC18.16■□□□□ 0.5
GFRA3O60609 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.16■□□□□ 0.5
GFRA3O60609 FEM1AP1-201ENST00000431297 1995 ntBASIC18.16■□□□□ 0.5
GFRA3O60609 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
GFRA3O60609 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
GFRA3O60609 AL162377.1-201ENST00000618844 1793 ntBASIC18.16■□□□□ 0.5
GFRA3O60609 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
GFRA3O60609 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
GFRA3O60609 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
GFRA3O60609 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.16■□□□□ 0.5
GFRA3O60609 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
GFRA3O60609 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
GFRA3O60609 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
GFRA3O60609 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
GFRA3O60609 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GFRA3O60609 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
GFRA3O60609 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
GFRA3O60609 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
GFRA3O60609 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
GFRA3O60609 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
GFRA3O60609 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
GFRA3O60609 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.15■□□□□ 0.5
GFRA3O60609 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
GFRA3O60609 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
GFRA3O60609 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC18.15■□□□□ 0.5
GFRA3O60609 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC18.15■□□□□ 0.5
GFRA3O60609 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.15■□□□□ 0.5
GFRA3O60609 AC025062.2-201ENST00000605477 670 ntBASIC18.15■□□□□ 0.5
GFRA3O60609 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.15■□□□□ 0.5
GFRA3O60609 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC18.15■□□□□ 0.5
GFRA3O60609 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
GFRA3O60609 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GFRA3O60609 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
GFRA3O60609 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GFRA3O60609 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GFRA3O60609 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
GFRA3O60609 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.15■□□□□ 0.5
GFRA3O60609 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GFRA3O60609 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
GFRA3O60609 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
GFRA3O60609 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
GFRA3O60609 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
GFRA3O60609 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GFRA3O60609 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
GFRA3O60609 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
GFRA3O60609 AL356309.3-201ENST00000624132 1934 ntBASIC18.14■□□□□ 0.49
GFRA3O60609 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
GFRA3O60609 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
GFRA3O60609 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GFRA3O60609 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
GFRA3O60609 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
GFRA3O60609 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.14■□□□□ 0.49
GFRA3O60609 TSEN15P1-201ENST00000423257 515 ntBASIC18.14■□□□□ 0.49
GFRA3O60609 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.14■□□□□ 0.49
GFRA3O60609 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.14■□□□□ 0.49
GFRA3O60609 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC18.14■□□□□ 0.49
GFRA3O60609 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
GFRA3O60609 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
GFRA3O60609 AC069262.1-201ENST00000539058 672 ntBASIC18.14■□□□□ 0.49
GFRA3O60609 C20orf181-201ENST00000623918 480 ntBASIC18.14■□□□□ 0.49
GFRA3O60609 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GFRA3O60609 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
GFRA3O60609 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.14■□□□□ 0.49
GFRA3O60609 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
GFRA3O60609 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GFRA3O60609 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.14■□□□□ 0.49
GFRA3O60609 AP005117.1-201ENST00000584346 1413 ntBASIC18.14■□□□□ 0.49
GFRA3O60609 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GFRA3O60609 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GFRA3O60609 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
GFRA3O60609 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GFRA3O60609 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.13■□□□□ 0.49
GFRA3O60609 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
GFRA3O60609 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
GFRA3O60609 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.13■□□□□ 0.49
GFRA3O60609 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.13■□□□□ 0.49
GFRA3O60609 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
GFRA3O60609 AC027612.4-201ENST00000605371 583 ntBASIC18.13■□□□□ 0.49
GFRA3O60609 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
GFRA3O60609 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GFRA3O60609 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GFRA3O60609 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
GFRA3O60609 AC002310.6-201ENST00000624451 1377 ntBASIC18.13■□□□□ 0.49
GFRA3O60609 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GFRA3O60609 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GFRA3O60609 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
GFRA3O60609 AC092720.2-201ENST00000602388 1665 ntBASIC18.12■□□□□ 0.49
GFRA3O60609 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GFRA3O60609 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GFRA3O60609 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GFRA3O60609 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
GFRA3O60609 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.12■□□□□ 0.49
GFRA3O60609 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms