Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH7O60245 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH7O60245 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
PCDH7O60245 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH7O60245 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDH7O60245 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH7O60245 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH7O60245 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH7O60245 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PCDH7O60245 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDH7O60245 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.9■□□□□ 0.46
PCDH7O60245 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.89■□□□□ 0.46
PCDH7O60245 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.89■□□□□ 0.46
PCDH7O60245 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
PCDH7O60245 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
PCDH7O60245 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDH7O60245 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDH7O60245 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.45
PCDH7O60245 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDH7O60245 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDH7O60245 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDH7O60245 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.89■□□□□ 0.45
PCDH7O60245 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCDH7O60245 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCDH7O60245 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCDH7O60245 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDH7O60245 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.89■□□□□ 0.45
PCDH7O60245 AC233702.5-201ENST00000584107 538 ntBASIC17.89■□□□□ 0.45
PCDH7O60245 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
PCDH7O60245 DGCR10-201ENST00000609839 495 ntBASIC17.89■□□□□ 0.45
PCDH7O60245 AC113410.3-201ENST00000623366 203 ntBASIC17.89■□□□□ 0.45
PCDH7O60245 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCDH7O60245 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDH7O60245 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCDH7O60245 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.89■□□□□ 0.45
PCDH7O60245 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.89■□□□□ 0.45
PCDH7O60245 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
PCDH7O60245 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDH7O60245 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDH7O60245 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDH7O60245 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDH7O60245 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDH7O60245 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDH7O60245 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
PCDH7O60245 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDH7O60245 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
PCDH7O60245 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.88■□□□□ 0.45
PCDH7O60245 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH7O60245 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH7O60245 RCC2P3-201ENST00000418112 1537 ntBASIC17.88■□□□□ 0.45
PCDH7O60245 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.88■□□□□ 0.45
PCDH7O60245 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.88■□□□□ 0.45
PCDH7O60245 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDH7O60245 AC116562.2-201ENST00000507042 360 ntBASIC17.88■□□□□ 0.45
PCDH7O60245 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.88■□□□□ 0.45
PCDH7O60245 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.88■□□□□ 0.45
PCDH7O60245 AC126763.1-201ENST00000552015 2118 ntBASIC17.88■□□□□ 0.45
PCDH7O60245 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.88■□□□□ 0.45
PCDH7O60245 AL049637.2-201ENST00000641778 930 ntBASIC17.88■□□□□ 0.45
PCDH7O60245 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH7O60245 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH7O60245 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH7O60245 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH7O60245 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH7O60245 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH7O60245 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.88■□□□□ 0.45
PCDH7O60245 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH7O60245 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDH7O60245 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH7O60245 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.88■□□□□ 0.45
PCDH7O60245 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH7O60245 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH7O60245 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH7O60245 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH7O60245 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH7O60245 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH7O60245 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDH7O60245 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH7O60245 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
PCDH7O60245 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.87■□□□□ 0.45
PCDH7O60245 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDH7O60245 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH7O60245 SLC25A1P4-201ENST00000567977 778 ntBASIC17.87■□□□□ 0.45
PCDH7O60245 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH7O60245 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH7O60245 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.87■□□□□ 0.45
PCDH7O60245 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH7O60245 AC096733.2-201ENST00000609937 1394 ntBASIC17.87■□□□□ 0.45
PCDH7O60245 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH7O60245 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH7O60245 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH7O60245 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDH7O60245 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH7O60245 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH7O60245 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH7O60245 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH7O60245 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH7O60245 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
PCDH7O60245 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
PCDH7O60245 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms