Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRAF3IP2O43734 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.68■□□□□ 0.26
TRAF3IP2O43734 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.68■□□□□ 0.26
TRAF3IP2O43734 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC16.68■□□□□ 0.26
TRAF3IP2O43734 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAF3IP2O43734 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAF3IP2O43734 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.68■□□□□ 0.26
TRAF3IP2O43734 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TRAF3IP2O43734 CYP2D8P-201ENST00000433633 1490 ntBASIC16.67■□□□□ 0.26
TRAF3IP2O43734 WIZP1-201ENST00000531444 2299 ntBASIC16.67■□□□□ 0.26
TRAF3IP2O43734 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.67■□□□□ 0.26
TRAF3IP2O43734 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.67■□□□□ 0.26
TRAF3IP2O43734 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.67■□□□□ 0.26
TRAF3IP2O43734 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
TRAF3IP2O43734 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAF3IP2O43734 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAF3IP2O43734 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
TRAF3IP2O43734 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.67■□□□□ 0.26
TRAF3IP2O43734 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TRAF3IP2O43734 MMP23A-201ENST00000234610 1017 ntBASIC16.67■□□□□ 0.26
TRAF3IP2O43734 TSPY14P-201ENST00000303979 915 ntBASIC16.67■□□□□ 0.26
TRAF3IP2O43734 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAF3IP2O43734 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRAF3IP2O43734 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.67■□□□□ 0.26
TRAF3IP2O43734 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.67■□□□□ 0.26
TRAF3IP2O43734 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.67■□□□□ 0.26
TRAF3IP2O43734 CCR12P-201ENST00000446203 998 ntBASIC16.67■□□□□ 0.26
TRAF3IP2O43734 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TRAF3IP2O43734 AP003041.3-201ENST00000527151 707 ntBASIC16.67■□□□□ 0.26
TRAF3IP2O43734 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAF3IP2O43734 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRAF3IP2O43734 AC010947.1-201ENST00000623454 693 ntBASIC16.67■□□□□ 0.26
TRAF3IP2O43734 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAF3IP2O43734 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRAF3IP2O43734 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAF3IP2O43734 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TRAF3IP2O43734 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
TRAF3IP2O43734 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAF3IP2O43734 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAF3IP2O43734 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.67■□□□□ 0.26
TRAF3IP2O43734 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TRAF3IP2O43734 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAF3IP2O43734 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRAF3IP2O43734 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRAF3IP2O43734 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.66■□□□□ 0.26
TRAF3IP2O43734 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAF3IP2O43734 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.66■□□□□ 0.26
TRAF3IP2O43734 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.66■□□□□ 0.26
TRAF3IP2O43734 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAF3IP2O43734 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAF3IP2O43734 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.66■□□□□ 0.26
TRAF3IP2O43734 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.66■□□□□ 0.26
TRAF3IP2O43734 EGLN1P1-201ENST00000531623 762 ntBASIC16.66■□□□□ 0.26
TRAF3IP2O43734 BX088651.1-201ENST00000540551 451 ntBASIC16.66■□□□□ 0.26
TRAF3IP2O43734 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAF3IP2O43734 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.66■□□□□ 0.26
TRAF3IP2O43734 AC116562.4-202ENST00000641738 218 ntBASIC16.66■□□□□ 0.26
TRAF3IP2O43734 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.66■□□□□ 0.26
TRAF3IP2O43734 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAF3IP2O43734 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRAF3IP2O43734 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAF3IP2O43734 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAF3IP2O43734 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAF3IP2O43734 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAF3IP2O43734 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAF3IP2O43734 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
TRAF3IP2O43734 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TRAF3IP2O43734 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAF3IP2O43734 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAF3IP2O43734 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TRAF3IP2O43734 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAF3IP2O43734 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAF3IP2O43734 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
TRAF3IP2O43734 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.65■□□□□ 0.26
TRAF3IP2O43734 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAF3IP2O43734 AC007663.1-201ENST00000438948 1240 ntBASIC16.65■□□□□ 0.26
TRAF3IP2O43734 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.65■□□□□ 0.26
TRAF3IP2O43734 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.65■□□□□ 0.26
TRAF3IP2O43734 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.65■□□□□ 0.26
TRAF3IP2O43734 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.65■□□□□ 0.26
TRAF3IP2O43734 NAPSB-206ENST00000562112 1266 ntBASIC16.65■□□□□ 0.26
TRAF3IP2O43734 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.65■□□□□ 0.26
TRAF3IP2O43734 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAF3IP2O43734 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TRAF3IP2O43734 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
TRAF3IP2O43734 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.65■□□□□ 0.26
TRAF3IP2O43734 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.65■□□□□ 0.26
TRAF3IP2O43734 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC16.65■□□□□ 0.26
TRAF3IP2O43734 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAF3IP2O43734 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TRAF3IP2O43734 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAF3IP2O43734 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAF3IP2O43734 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.65■□□□□ 0.26
TRAF3IP2O43734 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.65■□□□□ 0.26
TRAF3IP2O43734 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
TRAF3IP2O43734 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAF3IP2O43734 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.64■□□□□ 0.25
TRAF3IP2O43734 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
TRAF3IP2O43734 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
TRAF3IP2O43734 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms