Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC23.22■■□□□ 1.31
SRGAP3O43295 AK4P3-201ENST00000418260 669 ntBASIC23.22■■□□□ 1.31
SRGAP3O43295 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC23.22■■□□□ 1.31
SRGAP3O43295 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC23.22■■□□□ 1.31
SRGAP3O43295 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC23.22■■□□□ 1.31
SRGAP3O43295 AL441883.1-201ENST00000566170 1045 ntBASIC23.22■■□□□ 1.31
SRGAP3O43295 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SRGAP3O43295 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SRGAP3O43295 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SRGAP3O43295 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SRGAP3O43295 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SRGAP3O43295 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC23.21■■□□□ 1.31
SRGAP3O43295 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
SRGAP3O43295 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC23.21■■□□□ 1.31
SRGAP3O43295 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SRGAP3O43295 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SRGAP3O43295 AP000523.1-201ENST00000398242 1049 ntBASIC23.21■■□□□ 1.31
SRGAP3O43295 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC23.21■■□□□ 1.31
SRGAP3O43295 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC23.21■■□□□ 1.31
SRGAP3O43295 DUX4L26-201ENST00000489078 1255 ntBASIC23.21■■□□□ 1.31
SRGAP3O43295 AC140113.3-201ENST00000605663 199 ntBASIC23.21■■□□□ 1.31
SRGAP3O43295 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC23.21■■□□□ 1.31
SRGAP3O43295 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
SRGAP3O43295 AC034236.2-201ENST00000606662 1610 ntBASIC23.21■■□□□ 1.31
SRGAP3O43295 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
SRGAP3O43295 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
SRGAP3O43295 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
SRGAP3O43295 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC23.2■■□□□ 1.31
SRGAP3O43295 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC23.2■■□□□ 1.3
SRGAP3O43295 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SRGAP3O43295 TNXA-203ENST00000507684 2038 ntBASIC23.2■■□□□ 1.3
SRGAP3O43295 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SRGAP3O43295 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SRGAP3O43295 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SRGAP3O43295 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SRGAP3O43295 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC23.2■■□□□ 1.3
SRGAP3O43295 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SRGAP3O43295 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC23.2■■□□□ 1.3
SRGAP3O43295 AC093525.10-201ENST00000625130 1569 ntBASIC23.2■■□□□ 1.3
SRGAP3O43295 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SRGAP3O43295 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SRGAP3O43295 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SRGAP3O43295 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SRGAP3O43295 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC23.2■■□□□ 1.3
SRGAP3O43295 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SRGAP3O43295 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC23.2■■□□□ 1.3
SRGAP3O43295 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
SRGAP3O43295 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
SRGAP3O43295 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SRGAP3O43295 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC23.2■■□□□ 1.3
SRGAP3O43295 ETFA-216ENST00000560726 942 ntTSL 3 BASIC23.2■■□□□ 1.3
SRGAP3O43295 GCSHP2-201ENST00000560971 527 ntBASIC23.2■■□□□ 1.3
SRGAP3O43295 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC23.2■■□□□ 1.3
SRGAP3O43295 AC024243.1-201ENST00000609234 778 ntBASIC23.2■■□□□ 1.3
SRGAP3O43295 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
SRGAP3O43295 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SRGAP3O43295 AL031432.5-201ENST00000641059 760 ntBASIC23.2■■□□□ 1.3
SRGAP3O43295 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SRGAP3O43295 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SRGAP3O43295 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC23.2■■□□□ 1.3
SRGAP3O43295 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
SRGAP3O43295 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC23.19■■□□□ 1.3
SRGAP3O43295 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SRGAP3O43295 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC23.19■■□□□ 1.3
SRGAP3O43295 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SRGAP3O43295 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC23.19■■□□□ 1.3
SRGAP3O43295 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
SRGAP3O43295 AL499627.1-201ENST00000569373 2188 ntBASIC23.19■■□□□ 1.3
SRGAP3O43295 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
SRGAP3O43295 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SRGAP3O43295 KRT18P23-201ENST00000435622 1283 ntBASIC23.19■■□□□ 1.3
SRGAP3O43295 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SRGAP3O43295 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SRGAP3O43295 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC23.19■■□□□ 1.3
SRGAP3O43295 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC23.19■■□□□ 1.3
SRGAP3O43295 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC23.19■■□□□ 1.3
SRGAP3O43295 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SRGAP3O43295 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC23.19■■□□□ 1.3
SRGAP3O43295 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
SRGAP3O43295 AC112497.1-201ENST00000624824 639 ntBASIC23.19■■□□□ 1.3
SRGAP3O43295 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SRGAP3O43295 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SRGAP3O43295 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC23.19■■□□□ 1.3
SRGAP3O43295 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SRGAP3O43295 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
SRGAP3O43295 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SRGAP3O43295 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC23.19■■□□□ 1.3
SRGAP3O43295 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC23.19■■□□□ 1.3
SRGAP3O43295 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC23.19■■□□□ 1.3
SRGAP3O43295 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
SRGAP3O43295 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC23.19■■□□□ 1.3
SRGAP3O43295 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SRGAP3O43295 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SRGAP3O43295 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
SRGAP3O43295 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
SRGAP3O43295 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
SRGAP3O43295 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
SRGAP3O43295 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
SRGAP3O43295 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SRGAP3O43295 HOXB1-202ENST00000577092 1414 ntBASIC23.18■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms