Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLOCKO15516 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLOCKO15516 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.77■□□□□ 0.44
CLOCKO15516 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.77■□□□□ 0.44
CLOCKO15516 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.77■□□□□ 0.44
CLOCKO15516 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.77■□□□□ 0.44
CLOCKO15516 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLOCKO15516 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.77■□□□□ 0.44
CLOCKO15516 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLOCKO15516 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLOCKO15516 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLOCKO15516 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLOCKO15516 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.77■□□□□ 0.44
CLOCKO15516 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CLOCKO15516 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.77■□□□□ 0.44
CLOCKO15516 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.77■□□□□ 0.44
CLOCKO15516 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.77■□□□□ 0.44
CLOCKO15516 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.77■□□□□ 0.44
CLOCKO15516 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.77■□□□□ 0.44
CLOCKO15516 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLOCKO15516 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.77■□□□□ 0.44
CLOCKO15516 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLOCKO15516 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLOCKO15516 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLOCKO15516 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
CLOCKO15516 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.77■□□□□ 0.43
CLOCKO15516 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
CLOCKO15516 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
CLOCKO15516 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
CLOCKO15516 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CLOCKO15516 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
CLOCKO15516 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CLOCKO15516 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLOCKO15516 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.76■□□□□ 0.43
CLOCKO15516 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLOCKO15516 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.76■□□□□ 0.43
CLOCKO15516 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CLOCKO15516 PRORSD1P-202ENST00000563365 2154 ntBASIC17.76■□□□□ 0.43
CLOCKO15516 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLOCKO15516 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.76■□□□□ 0.43
CLOCKO15516 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.76■□□□□ 0.43
CLOCKO15516 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLOCKO15516 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.76■□□□□ 0.43
CLOCKO15516 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.76■□□□□ 0.43
CLOCKO15516 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CLOCKO15516 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.76■□□□□ 0.43
CLOCKO15516 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.76■□□□□ 0.43
CLOCKO15516 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLOCKO15516 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLOCKO15516 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLOCKO15516 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLOCKO15516 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.76■□□□□ 0.43
CLOCKO15516 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLOCKO15516 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.75■□□□□ 0.43
CLOCKO15516 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.75■□□□□ 0.43
CLOCKO15516 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLOCKO15516 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.75■□□□□ 0.43
CLOCKO15516 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CLOCKO15516 AL162741.1-201ENST00000565563 1558 ntBASIC17.75■□□□□ 0.43
CLOCKO15516 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
CLOCKO15516 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CLOCKO15516 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLOCKO15516 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLOCKO15516 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLOCKO15516 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CLOCKO15516 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLOCKO15516 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLOCKO15516 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.75■□□□□ 0.43
CLOCKO15516 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLOCKO15516 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.75■□□□□ 0.43
CLOCKO15516 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.75■□□□□ 0.43
CLOCKO15516 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.75■□□□□ 0.43
CLOCKO15516 UNC93B5-201ENST00000530315 699 ntBASIC17.75■□□□□ 0.43
CLOCKO15516 AP003097.1-201ENST00000530657 1135 ntBASIC17.75■□□□□ 0.43
CLOCKO15516 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLOCKO15516 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.75■□□□□ 0.43
CLOCKO15516 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CLOCKO15516 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLOCKO15516 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CLOCKO15516 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLOCKO15516 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CLOCKO15516 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.75■□□□□ 0.43
CLOCKO15516 PKD1P1-201ENST00000458669 6805 ntBASIC17.75■□□□□ 0.43
CLOCKO15516 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.74■□□□□ 0.43
CLOCKO15516 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
CLOCKO15516 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CLOCKO15516 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CLOCKO15516 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CLOCKO15516 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLOCKO15516 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.74■□□□□ 0.43
CLOCKO15516 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLOCKO15516 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLOCKO15516 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CLOCKO15516 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLOCKO15516 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLOCKO15516 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.74■□□□□ 0.43
CLOCKO15516 AC026366.1-201ENST00000488803 879 ntBASIC17.74■□□□□ 0.43
CLOCKO15516 AC093827.2-201ENST00000512654 315 ntBASIC17.74■□□□□ 0.43
CLOCKO15516 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CLOCKO15516 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms