Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP3D1O14617 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
AP3D1O14617 PRORSD1P-201ENST00000295112 541 ntBASIC17.51■□□□□ 0.39
AP3D1O14617 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP3D1O14617 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.51■□□□□ 0.39
AP3D1O14617 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP3D1O14617 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP3D1O14617 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
AP3D1O14617 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.51■□□□□ 0.39
AP3D1O14617 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.51■□□□□ 0.39
AP3D1O14617 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.51■□□□□ 0.39
AP3D1O14617 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.51■□□□□ 0.39
AP3D1O14617 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.51■□□□□ 0.39
AP3D1O14617 AL359736.2-201ENST00000621992 437 ntBASIC17.51■□□□□ 0.39
AP3D1O14617 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.51■□□□□ 0.39
AP3D1O14617 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.51■□□□□ 0.39
AP3D1O14617 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP3D1O14617 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
AP3D1O14617 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP3D1O14617 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
AP3D1O14617 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP3D1O14617 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
AP3D1O14617 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
AP3D1O14617 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
AP3D1O14617 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
AP3D1O14617 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
AP3D1O14617 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
AP3D1O14617 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.5■□□□□ 0.39
AP3D1O14617 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
AP3D1O14617 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
AP3D1O14617 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
AP3D1O14617 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
AP3D1O14617 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.5■□□□□ 0.39
AP3D1O14617 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
AP3D1O14617 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.5■□□□□ 0.39
AP3D1O14617 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
AP3D1O14617 AC083906.6-201ENST00000641366 219 ntBASIC17.5■□□□□ 0.39
AP3D1O14617 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.5■□□□□ 0.39
AP3D1O14617 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
AP3D1O14617 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
AP3D1O14617 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
AP3D1O14617 AC020916.1-201ENST00000587762 1774 ntBASIC17.5■□□□□ 0.39
AP3D1O14617 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.5■□□□□ 0.39
AP3D1O14617 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
AP3D1O14617 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
AP3D1O14617 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
AP3D1O14617 WIZP1-201ENST00000531444 2299 ntBASIC17.5■□□□□ 0.39
AP3D1O14617 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.5■□□□□ 0.39
AP3D1O14617 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
AP3D1O14617 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
AP3D1O14617 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
AP3D1O14617 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.5■□□□□ 0.39
AP3D1O14617 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.5■□□□□ 0.39
AP3D1O14617 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
AP3D1O14617 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP3D1O14617 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP3D1O14617 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
AP3D1O14617 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP3D1O14617 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP3D1O14617 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP3D1O14617 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP3D1O14617 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.49■□□□□ 0.39
AP3D1O14617 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
AP3D1O14617 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.49■□□□□ 0.39
AP3D1O14617 KRT8P41-201ENST00000533985 1514 ntBASIC17.49■□□□□ 0.39
AP3D1O14617 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP3D1O14617 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP3D1O14617 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP3D1O14617 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.49■□□□□ 0.39
AP3D1O14617 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
AP3D1O14617 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.49■□□□□ 0.39
AP3D1O14617 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
AP3D1O14617 RPS2P4-201ENST00000476944 856 ntBASIC17.49■□□□□ 0.39
AP3D1O14617 Z85996.1-201ENST00000494644 937 ntBASIC17.49■□□□□ 0.39
AP3D1O14617 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP3D1O14617 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.49■□□□□ 0.39
AP3D1O14617 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.49■□□□□ 0.39
AP3D1O14617 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
AP3D1O14617 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.49■□□□□ 0.39
AP3D1O14617 FAM197Y4-202ENST00000622692 608 ntBASIC17.49■□□□□ 0.39
AP3D1O14617 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP3D1O14617 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP3D1O14617 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
AP3D1O14617 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP3D1O14617 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP3D1O14617 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
AP3D1O14617 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
AP3D1O14617 AC104581.1-202ENST00000635932 2618 ntBASIC17.49■□□□□ 0.39
AP3D1O14617 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.48■□□□□ 0.39
AP3D1O14617 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.48■□□□□ 0.39
AP3D1O14617 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
AP3D1O14617 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP3D1O14617 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP3D1O14617 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
AP3D1O14617 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP3D1O14617 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP3D1O14617 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.48■□□□□ 0.39
AP3D1O14617 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
AP3D1O14617 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
AP3D1O14617 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms