Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
RTCAO00442 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RTCAO00442 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTCAO00442 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.86■□□□□ 0.45
RTCAO00442 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTCAO00442 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTCAO00442 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RTCAO00442 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RTCAO00442 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RTCAO00442 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RTCAO00442 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.85■□□□□ 0.45
RTCAO00442 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RTCAO00442 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RTCAO00442 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.85■□□□□ 0.45
RTCAO00442 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.85■□□□□ 0.45
RTCAO00442 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.85■□□□□ 0.45
RTCAO00442 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.85■□□□□ 0.45
RTCAO00442 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.85■□□□□ 0.45
RTCAO00442 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.85■□□□□ 0.45
RTCAO00442 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.85■□□□□ 0.45
RTCAO00442 CA15P1-201ENST00000481698 905 ntBASIC17.85■□□□□ 0.45
RTCAO00442 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RTCAO00442 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.85■□□□□ 0.45
RTCAO00442 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
RTCAO00442 AL357033.4-201ENST00000617703 1807 ntBASIC17.85■□□□□ 0.45
RTCAO00442 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.85■□□□□ 0.45
RTCAO00442 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.85■□□□□ 0.45
RTCAO00442 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
RTCAO00442 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RTCAO00442 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.85■□□□□ 0.45
RTCAO00442 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RTCAO00442 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTCAO00442 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.84■□□□□ 0.45
RTCAO00442 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.84■□□□□ 0.45
RTCAO00442 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTCAO00442 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTCAO00442 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.84■□□□□ 0.45
RTCAO00442 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.84■□□□□ 0.45
RTCAO00442 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
RTCAO00442 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RTCAO00442 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
RTCAO00442 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.84■□□□□ 0.45
RTCAO00442 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTCAO00442 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTCAO00442 INGX-201ENST00000359239 846 ntBASIC17.84■□□□□ 0.45
RTCAO00442 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.84■□□□□ 0.45
RTCAO00442 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.84■□□□□ 0.45
RTCAO00442 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RTCAO00442 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
RTCAO00442 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.84■□□□□ 0.45
RTCAO00442 AL023803.3-201ENST00000615559 522 ntBASIC17.84■□□□□ 0.45
RTCAO00442 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.84■□□□□ 0.45
RTCAO00442 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.84■□□□□ 0.45
RTCAO00442 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.84■□□□□ 0.45
RTCAO00442 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTCAO00442 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTCAO00442 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
RTCAO00442 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.84■□□□□ 0.45
RTCAO00442 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
RTCAO00442 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTCAO00442 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.84■□□□□ 0.45
RTCAO00442 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTCAO00442 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RTCAO00442 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTCAO00442 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RTCAO00442 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTCAO00442 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.84■□□□□ 0.45
RTCAO00442 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.84■□□□□ 0.45
RTCAO00442 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RTCAO00442 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTCAO00442 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTCAO00442 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RTCAO00442 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.83■□□□□ 0.45
RTCAO00442 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RTCAO00442 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.83■□□□□ 0.45
RTCAO00442 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
RTCAO00442 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RTCAO00442 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
RTCAO00442 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RTCAO00442 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
RTCAO00442 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
RTCAO00442 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
RTCAO00442 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.83■□□□□ 0.45
RTCAO00442 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RTCAO00442 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RTCAO00442 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.83■□□□□ 0.45
RTCAO00442 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.83■□□□□ 0.45
RTCAO00442 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
RTCAO00442 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RTCAO00442 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RTCAO00442 MMP23A-201ENST00000234610 1017 ntBASIC17.83■□□□□ 0.44
RTCAO00442 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
RTCAO00442 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
RTCAO00442 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.83■□□□□ 0.44
RTCAO00442 AP003041.3-201ENST00000527151 707 ntBASIC17.83■□□□□ 0.44
RTCAO00442 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RTCAO00442 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.83■□□□□ 0.44
RTCAO00442 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.83■□□□□ 0.44
RTCAO00442 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RTCAO00442 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms