Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC14.78□□□□□ -0.04
LINC01548A6NM66 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LINC01548A6NM66 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
LINC01548A6NM66 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
LINC01548A6NM66 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
LINC01548A6NM66 MTMR9LP-203ENST00000426597 1545 ntBASIC14.77□□□□□ -0.04
LINC01548A6NM66 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
LINC01548A6NM66 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.04
LINC01548A6NM66 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LINC01548A6NM66 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
LINC01548A6NM66 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
LINC01548A6NM66 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC14.77□□□□□ -0.04
LINC01548A6NM66 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LINC01548A6NM66 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
LINC01548A6NM66 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LINC01548A6NM66 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LINC01548A6NM66 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LINC01548A6NM66 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LINC01548A6NM66 BX664615.1-201ENST00000443558 458 ntBASIC14.77□□□□□ -0.05
LINC01548A6NM66 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC14.77□□□□□ -0.05
LINC01548A6NM66 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC14.77□□□□□ -0.05
LINC01548A6NM66 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC14.77□□□□□ -0.05
LINC01548A6NM66 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LINC01548A6NM66 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC14.77□□□□□ -0.05
LINC01548A6NM66 AC011558.1-201ENST00000623459 338 ntBASIC14.77□□□□□ -0.05
LINC01548A6NM66 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LINC01548A6NM66 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC14.77□□□□□ -0.05
LINC01548A6NM66 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC01548A6NM66 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC01548A6NM66 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC01548A6NM66 AC018445.3-201ENST00000624177 1945 ntBASIC14.76□□□□□ -0.05
LINC01548A6NM66 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC14.76□□□□□ -0.05
LINC01548A6NM66 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
LINC01548A6NM66 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC01548A6NM66 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC14.76□□□□□ -0.05
LINC01548A6NM66 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC14.76□□□□□ -0.05
LINC01548A6NM66 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC14.76□□□□□ -0.05
LINC01548A6NM66 ENSA-205ENST00000361532 792 ntTSL 2 BASIC14.76□□□□□ -0.05
LINC01548A6NM66 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC14.76□□□□□ -0.05
LINC01548A6NM66 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC01548A6NM66 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC14.76□□□□□ -0.05
LINC01548A6NM66 COX11P1-201ENST00000489116 835 ntBASIC14.76□□□□□ -0.05
LINC01548A6NM66 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LINC01548A6NM66 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC14.76□□□□□ -0.05
LINC01548A6NM66 AL512604.3-201ENST00000569583 964 ntBASIC14.76□□□□□ -0.05
LINC01548A6NM66 WWOX-216ENST00000569818 525 ntBASIC14.76□□□□□ -0.05
LINC01548A6NM66 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC14.76□□□□□ -0.05
LINC01548A6NM66 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
LINC01548A6NM66 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC01548A6NM66 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC01548A6NM66 SNAI3-AS1-205ENST00000568633 2096 ntBASIC14.76□□□□□ -0.05
LINC01548A6NM66 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC01548A6NM66 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
LINC01548A6NM66 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
LINC01548A6NM66 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC01548A6NM66 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC01548A6NM66 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC01548A6NM66 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC01548A6NM66 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LINC01548A6NM66 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC01548A6NM66 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC01548A6NM66 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
LINC01548A6NM66 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC01548A6NM66 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
LINC01548A6NM66 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC01548A6NM66 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
LINC01548A6NM66 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
LINC01548A6NM66 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LINC01548A6NM66 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
LINC01548A6NM66 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
LINC01548A6NM66 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC01548A6NM66 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LINC01548A6NM66 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC14.75□□□□□ -0.05
LINC01548A6NM66 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC01548A6NM66 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC01548A6NM66 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC01548A6NM66 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC01548A6NM66 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LINC01548A6NM66 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LINC01548A6NM66 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC01548A6NM66 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC14.75□□□□□ -0.05
LINC01548A6NM66 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC01548A6NM66 MIR564-202ENST00000385049 94 ntBASIC14.75□□□□□ -0.05
LINC01548A6NM66 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC14.75□□□□□ -0.05
LINC01548A6NM66 AK4P3-201ENST00000418260 669 ntBASIC14.75□□□□□ -0.05
LINC01548A6NM66 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC01548A6NM66 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC01548A6NM66 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC14.75□□□□□ -0.05
LINC01548A6NM66 YBX1P2-201ENST00000489612 999 ntBASIC14.75□□□□□ -0.05
LINC01548A6NM66 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LINC01548A6NM66 AL441883.1-201ENST00000566170 1045 ntBASIC14.75□□□□□ -0.05
LINC01548A6NM66 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC14.75□□□□□ -0.05
LINC01548A6NM66 AC140113.3-201ENST00000605663 199 ntBASIC14.75□□□□□ -0.05
LINC01548A6NM66 AC083906.6-201ENST00000641366 219 ntBASIC14.75□□□□□ -0.05
LINC01548A6NM66 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LINC01548A6NM66 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC14.75□□□□□ -0.05
LINC01548A6NM66 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC01548A6NM66 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC01548A6NM66 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC14.74□□□□□ -0.05
LINC01548A6NM66 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms