Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRRC53A6NM62 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRRC53A6NM62 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LRRC53A6NM62 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRRC53A6NM62 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRRC53A6NM62 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRRC53A6NM62 AC068880.1-201ENST00000507289 2297 ntBASIC20.2■□□□□ 0.82
LRRC53A6NM62 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRRC53A6NM62 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LRRC53A6NM62 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
LRRC53A6NM62 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRRC53A6NM62 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.2■□□□□ 0.82
LRRC53A6NM62 AC008040.2-201ENST00000461049 708 ntBASIC20.2■□□□□ 0.82
LRRC53A6NM62 C1QBPP2-201ENST00000528754 825 ntBASIC20.2■□□□□ 0.82
LRRC53A6NM62 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.2■□□□□ 0.82
LRRC53A6NM62 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.2■□□□□ 0.82
LRRC53A6NM62 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.2■□□□□ 0.82
LRRC53A6NM62 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LRRC53A6NM62 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRRC53A6NM62 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.2■□□□□ 0.82
LRRC53A6NM62 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.2■□□□□ 0.82
LRRC53A6NM62 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRRC53A6NM62 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LRRC53A6NM62 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRRC53A6NM62 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRRC53A6NM62 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRRC53A6NM62 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.2■□□□□ 0.82
LRRC53A6NM62 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.2■□□□□ 0.82
LRRC53A6NM62 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.2■□□□□ 0.82
LRRC53A6NM62 KRT16P1-201ENST00000399124 1418 ntBASIC20.19■□□□□ 0.82
LRRC53A6NM62 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC53A6NM62 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC53A6NM62 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC53A6NM62 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC20.19■□□□□ 0.82
LRRC53A6NM62 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
LRRC53A6NM62 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC53A6NM62 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.19■□□□□ 0.82
LRRC53A6NM62 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.19■□□□□ 0.82
LRRC53A6NM62 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC53A6NM62 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.19■□□□□ 0.82
LRRC53A6NM62 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.19■□□□□ 0.82
LRRC53A6NM62 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
LRRC53A6NM62 MIR4651-201ENST00000582622 73 ntBASIC20.19■□□□□ 0.82
LRRC53A6NM62 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.19■□□□□ 0.82
LRRC53A6NM62 AL162741.1-201ENST00000565563 1558 ntBASIC20.19■□□□□ 0.82
LRRC53A6NM62 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC53A6NM62 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
LRRC53A6NM62 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC53A6NM62 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC53A6NM62 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC20.19■□□□□ 0.82
LRRC53A6NM62 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.19■□□□□ 0.82
LRRC53A6NM62 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
LRRC53A6NM62 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC53A6NM62 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRRC53A6NM62 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC20.18■□□□□ 0.82
LRRC53A6NM62 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRRC53A6NM62 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LRRC53A6NM62 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.18■□□□□ 0.82
LRRC53A6NM62 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.18■□□□□ 0.82
LRRC53A6NM62 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRRC53A6NM62 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRRC53A6NM62 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
LRRC53A6NM62 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRRC53A6NM62 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.18■□□□□ 0.82
LRRC53A6NM62 AC011298.2-201ENST00000617989 482 ntBASIC20.18■□□□□ 0.82
LRRC53A6NM62 CR392000.1-201ENST00000624770 1228 ntBASIC20.18■□□□□ 0.82
LRRC53A6NM62 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRRC53A6NM62 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRRC53A6NM62 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.18■□□□□ 0.82
LRRC53A6NM62 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRRC53A6NM62 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC20.18■□□□□ 0.82
LRRC53A6NM62 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRRC53A6NM62 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRRC53A6NM62 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.17■□□□□ 0.82
LRRC53A6NM62 RCC2P3-201ENST00000418112 1537 ntBASIC20.17■□□□□ 0.82
LRRC53A6NM62 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRRC53A6NM62 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRRC53A6NM62 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRRC53A6NM62 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRRC53A6NM62 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.17■□□□□ 0.82
LRRC53A6NM62 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.17■□□□□ 0.82
LRRC53A6NM62 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LRRC53A6NM62 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
LRRC53A6NM62 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRRC53A6NM62 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.17■□□□□ 0.82
LRRC53A6NM62 CKBP1-201ENST00000565489 1086 ntBASIC20.17■□□□□ 0.82
LRRC53A6NM62 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LRRC53A6NM62 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRRC53A6NM62 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRRC53A6NM62 PCDHB18P-201ENST00000524813 2368 ntBASIC20.17■□□□□ 0.82
LRRC53A6NM62 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRRC53A6NM62 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
LRRC53A6NM62 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
LRRC53A6NM62 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LRRC53A6NM62 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.17■□□□□ 0.82
LRRC53A6NM62 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRRC53A6NM62 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LRRC53A6NM62 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LRRC53A6NM62 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LRRC53A6NM62 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms