Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC25.34■■□□□ 1.65
SBNO1A3KN83 MED22-202ENST00000371999 987 ntTSL 3 BASIC25.34■■□□□ 1.65
SBNO1A3KN83 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SBNO1A3KN83 POM121L3P-201ENST00000419331 1163 ntBASIC25.34■■□□□ 1.65
SBNO1A3KN83 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC25.34■■□□□ 1.65
SBNO1A3KN83 FAM197Y8-203ENST00000450145 560 ntBASIC25.34■■□□□ 1.65
SBNO1A3KN83 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC25.34■■□□□ 1.65
SBNO1A3KN83 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC25.34■■□□□ 1.65
SBNO1A3KN83 BNIP3P18-201ENST00000593976 575 ntBASIC25.34■■□□□ 1.65
SBNO1A3KN83 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SBNO1A3KN83 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC25.34■■□□□ 1.65
SBNO1A3KN83 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC25.34■■□□□ 1.65
SBNO1A3KN83 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
SBNO1A3KN83 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SBNO1A3KN83 Z82202.1-201ENST00000623446 1880 ntBASIC25.34■■□□□ 1.65
SBNO1A3KN83 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SBNO1A3KN83 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SBNO1A3KN83 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SBNO1A3KN83 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SBNO1A3KN83 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SBNO1A3KN83 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC25.34■■□□□ 1.65
SBNO1A3KN83 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SBNO1A3KN83 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
SBNO1A3KN83 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC25.33■■□□□ 1.65
SBNO1A3KN83 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
SBNO1A3KN83 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC25.33■■□□□ 1.65
SBNO1A3KN83 NAT14-202ENST00000587400 416 ntTSL 5 BASIC25.33■■□□□ 1.65
SBNO1A3KN83 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
SBNO1A3KN83 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC25.33■■□□□ 1.65
SBNO1A3KN83 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC25.33■■□□□ 1.65
SBNO1A3KN83 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
SBNO1A3KN83 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
SBNO1A3KN83 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC25.33■■□□□ 1.64
SBNO1A3KN83 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC25.33■■□□□ 1.64
SBNO1A3KN83 AC034236.2-201ENST00000606662 1610 ntBASIC25.33■■□□□ 1.64
SBNO1A3KN83 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.64
SBNO1A3KN83 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.64
SBNO1A3KN83 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
SBNO1A3KN83 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
SBNO1A3KN83 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SBNO1A3KN83 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SBNO1A3KN83 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SBNO1A3KN83 AC018712.1-201ENST00000455767 687 ntBASIC25.32■■□□□ 1.64
SBNO1A3KN83 RNPS1P1-201ENST00000507437 918 ntBASIC25.32■■□□□ 1.64
SBNO1A3KN83 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC25.32■■□□□ 1.64
SBNO1A3KN83 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC25.32■■□□□ 1.64
SBNO1A3KN83 AC106730.1-201ENST00000566722 1090 ntBASIC25.32■■□□□ 1.64
SBNO1A3KN83 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
SBNO1A3KN83 ABBA01031661.1-201ENST00000634362 1253 ntBASIC25.32■■□□□ 1.64
SBNO1A3KN83 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC25.32■■□□□ 1.64
SBNO1A3KN83 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SBNO1A3KN83 AL353692.3-201ENST00000407031 1396 ntBASIC25.32■■□□□ 1.64
SBNO1A3KN83 AC243591.1-201ENST00000452967 1364 ntBASIC25.32■■□□□ 1.64
SBNO1A3KN83 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
SBNO1A3KN83 KRT8P32-201ENST00000512863 1461 ntBASIC25.32■■□□□ 1.64
SBNO1A3KN83 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC25.32■■□□□ 1.64
SBNO1A3KN83 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC25.32■■□□□ 1.64
SBNO1A3KN83 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SBNO1A3KN83 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC25.32■■□□□ 1.64
SBNO1A3KN83 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC25.32■■□□□ 1.64
SBNO1A3KN83 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SBNO1A3KN83 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC25.32■■□□□ 1.64
SBNO1A3KN83 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
SBNO1A3KN83 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SBNO1A3KN83 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC25.31■■□□□ 1.64
SBNO1A3KN83 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
SBNO1A3KN83 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC25.31■■□□□ 1.64
SBNO1A3KN83 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC25.31■■□□□ 1.64
SBNO1A3KN83 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC25.31■■□□□ 1.64
SBNO1A3KN83 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SBNO1A3KN83 AC148477.8-201ENST00000624298 468 ntBASIC25.31■■□□□ 1.64
SBNO1A3KN83 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
SBNO1A3KN83 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SBNO1A3KN83 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
SBNO1A3KN83 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SBNO1A3KN83 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SBNO1A3KN83 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
SBNO1A3KN83 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC25.31■■□□□ 1.64
SBNO1A3KN83 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
SBNO1A3KN83 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC25.31■■□□□ 1.64
SBNO1A3KN83 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC25.31■■□□□ 1.64
SBNO1A3KN83 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC25.31■■□□□ 1.64
SBNO1A3KN83 MIR7706-201ENST00000613747 67 ntBASIC25.31■■□□□ 1.64
SBNO1A3KN83 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
SBNO1A3KN83 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC25.3■■□□□ 1.64
SBNO1A3KN83 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
SBNO1A3KN83 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
SBNO1A3KN83 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC25.3■■□□□ 1.64
SBNO1A3KN83 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SBNO1A3KN83 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC25.3■■□□□ 1.64
SBNO1A3KN83 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC25.3■■□□□ 1.64
SBNO1A3KN83 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC25.3■■□□□ 1.64
SBNO1A3KN83 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
SBNO1A3KN83 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
SBNO1A3KN83 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SBNO1A3KN83 AC092183.1-201ENST00000469884 875 ntBASIC25.3■■□□□ 1.64
SBNO1A3KN83 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
SBNO1A3KN83 AC006333.2-201ENST00000607957 2099 ntBASIC25.29■■□□□ 1.64
SBNO1A3KN83 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
SBNO1A3KN83 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms