Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TCRBV3S1A0A5B6 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
TCRBV3S1A0A5B6 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.53■□□□□ 0.4
TCRBV3S1A0A5B6 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TCRBV3S1A0A5B6 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.53■□□□□ 0.4
TCRBV3S1A0A5B6 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TCRBV3S1A0A5B6 KRT8P32-201ENST00000512863 1461 ntBASIC17.53■□□□□ 0.4
TCRBV3S1A0A5B6 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC17.53■□□□□ 0.4
TCRBV3S1A0A5B6 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TCRBV3S1A0A5B6 MIR638-201ENST00000385237 100 ntBASIC17.53■□□□□ 0.4
TCRBV3S1A0A5B6 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.53■□□□□ 0.4
TCRBV3S1A0A5B6 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TCRBV3S1A0A5B6 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.53■□□□□ 0.4
TCRBV3S1A0A5B6 AC006015.1-201ENST00000429970 570 ntBASIC17.53■□□□□ 0.4
TCRBV3S1A0A5B6 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC17.53■□□□□ 0.4
TCRBV3S1A0A5B6 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TCRBV3S1A0A5B6 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.53■□□□□ 0.4
TCRBV3S1A0A5B6 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
TCRBV3S1A0A5B6 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TCRBV3S1A0A5B6 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
TCRBV3S1A0A5B6 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TCRBV3S1A0A5B6 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TCRBV3S1A0A5B6 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TCRBV3S1A0A5B6 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TCRBV3S1A0A5B6 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.53■□□□□ 0.4
TCRBV3S1A0A5B6 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TCRBV3S1A0A5B6 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
TCRBV3S1A0A5B6 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TCRBV3S1A0A5B6 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
TCRBV3S1A0A5B6 AC141586.5-201ENST00000624546 2050 ntBASIC17.52■□□□□ 0.4
TCRBV3S1A0A5B6 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.52■□□□□ 0.4
TCRBV3S1A0A5B6 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TCRBV3S1A0A5B6 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TCRBV3S1A0A5B6 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.52■□□□□ 0.4
TCRBV3S1A0A5B6 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TCRBV3S1A0A5B6 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
TCRBV3S1A0A5B6 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
TCRBV3S1A0A5B6 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.52■□□□□ 0.4
TCRBV3S1A0A5B6 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.52■□□□□ 0.4
TCRBV3S1A0A5B6 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TCRBV3S1A0A5B6 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TCRBV3S1A0A5B6 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
TCRBV3S1A0A5B6 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TCRBV3S1A0A5B6 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.52■□□□□ 0.4
TCRBV3S1A0A5B6 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TCRBV3S1A0A5B6 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.52■□□□□ 0.4
TCRBV3S1A0A5B6 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.52■□□□□ 0.4
TCRBV3S1A0A5B6 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.52■□□□□ 0.4
TCRBV3S1A0A5B6 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TCRBV3S1A0A5B6 AL160286.2-201ENST00000567150 934 ntBASIC17.52■□□□□ 0.4
TCRBV3S1A0A5B6 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.52■□□□□ 0.4
TCRBV3S1A0A5B6 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
TCRBV3S1A0A5B6 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TCRBV3S1A0A5B6 MAZ-216ENST00000616501 991 ntTSL 5 BASIC17.52■□□□□ 0.4
TCRBV3S1A0A5B6 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TCRBV3S1A0A5B6 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TCRBV3S1A0A5B6 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
TCRBV3S1A0A5B6 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.52■□□□□ 0.39
TCRBV3S1A0A5B6 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
TCRBV3S1A0A5B6 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TCRBV3S1A0A5B6 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
TCRBV3S1A0A5B6 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TCRBV3S1A0A5B6 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
TCRBV3S1A0A5B6 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TCRBV3S1A0A5B6 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TCRBV3S1A0A5B6 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.51■□□□□ 0.39
TCRBV3S1A0A5B6 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TCRBV3S1A0A5B6 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TCRBV3S1A0A5B6 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
TCRBV3S1A0A5B6 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TCRBV3S1A0A5B6 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TCRBV3S1A0A5B6 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TCRBV3S1A0A5B6 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TCRBV3S1A0A5B6 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TCRBV3S1A0A5B6 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
TCRBV3S1A0A5B6 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TCRBV3S1A0A5B6 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.51■□□□□ 0.39
TCRBV3S1A0A5B6 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.51■□□□□ 0.39
TCRBV3S1A0A5B6 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.51■□□□□ 0.39
TCRBV3S1A0A5B6 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.51■□□□□ 0.39
TCRBV3S1A0A5B6 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
TCRBV3S1A0A5B6 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
TCRBV3S1A0A5B6 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC17.51■□□□□ 0.39
TCRBV3S1A0A5B6 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TCRBV3S1A0A5B6 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TCRBV3S1A0A5B6 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TCRBV3S1A0A5B6 PP12613-201ENST00000424958 2230 ntBASIC17.51■□□□□ 0.39
TCRBV3S1A0A5B6 AC084018.2-201ENST00000613093 2607 ntBASIC17.51■□□□□ 0.39
TCRBV3S1A0A5B6 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TCRBV3S1A0A5B6 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
TCRBV3S1A0A5B6 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TCRBV3S1A0A5B6 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TCRBV3S1A0A5B6 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TCRBV3S1A0A5B6 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.5■□□□□ 0.39
TCRBV3S1A0A5B6 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TCRBV3S1A0A5B6 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TCRBV3S1A0A5B6 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TCRBV3S1A0A5B6 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TCRBV3S1A0A5B6 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TCRBV3S1A0A5B6 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms