Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
TRDV1A0A1B0GX56 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC16.48■□□□□ 0.23
TRDV1A0A1B0GX56 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
TRDV1A0A1B0GX56 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRDV1A0A1B0GX56 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRDV1A0A1B0GX56 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRDV1A0A1B0GX56 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRDV1A0A1B0GX56 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRDV1A0A1B0GX56 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.48■□□□□ 0.23
TRDV1A0A1B0GX56 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
TRDV1A0A1B0GX56 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRDV1A0A1B0GX56 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.47■□□□□ 0.23
TRDV1A0A1B0GX56 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRDV1A0A1B0GX56 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRDV1A0A1B0GX56 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
TRDV1A0A1B0GX56 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRDV1A0A1B0GX56 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRDV1A0A1B0GX56 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC16.47■□□□□ 0.23
TRDV1A0A1B0GX56 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.47■□□□□ 0.23
TRDV1A0A1B0GX56 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.47■□□□□ 0.23
TRDV1A0A1B0GX56 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
TRDV1A0A1B0GX56 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.47■□□□□ 0.23
TRDV1A0A1B0GX56 FLJ13224-201ENST00000313737 1514 ntBASIC16.47■□□□□ 0.23
TRDV1A0A1B0GX56 HACD1-201ENST00000326961 773 ntTSL 2 BASIC16.47■□□□□ 0.23
TRDV1A0A1B0GX56 MFF-205ENST00000354503 1085 ntTSL 2 BASIC16.47■□□□□ 0.23
TRDV1A0A1B0GX56 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC16.47■□□□□ 0.23
TRDV1A0A1B0GX56 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.47■□□□□ 0.23
TRDV1A0A1B0GX56 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC16.47■□□□□ 0.23
TRDV1A0A1B0GX56 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
TRDV1A0A1B0GX56 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
TRDV1A0A1B0GX56 AC006557.6-201ENST00000623071 864 ntBASIC16.47■□□□□ 0.23
TRDV1A0A1B0GX56 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
TRDV1A0A1B0GX56 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRDV1A0A1B0GX56 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRDV1A0A1B0GX56 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
TRDV1A0A1B0GX56 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.47■□□□□ 0.23
TRDV1A0A1B0GX56 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRDV1A0A1B0GX56 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRDV1A0A1B0GX56 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRDV1A0A1B0GX56 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
TRDV1A0A1B0GX56 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRDV1A0A1B0GX56 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
TRDV1A0A1B0GX56 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRDV1A0A1B0GX56 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRDV1A0A1B0GX56 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRDV1A0A1B0GX56 PCDHA12-202ENST00000613593 2588 ntBASIC16.46■□□□□ 0.23
TRDV1A0A1B0GX56 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRDV1A0A1B0GX56 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRDV1A0A1B0GX56 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
TRDV1A0A1B0GX56 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRDV1A0A1B0GX56 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.46■□□□□ 0.23
TRDV1A0A1B0GX56 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
TRDV1A0A1B0GX56 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRDV1A0A1B0GX56 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRDV1A0A1B0GX56 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRDV1A0A1B0GX56 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRDV1A0A1B0GX56 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC16.46■□□□□ 0.23
TRDV1A0A1B0GX56 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.46■□□□□ 0.23
TRDV1A0A1B0GX56 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
TRDV1A0A1B0GX56 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.46■□□□□ 0.23
TRDV1A0A1B0GX56 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
TRDV1A0A1B0GX56 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRDV1A0A1B0GX56 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRDV1A0A1B0GX56 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRDV1A0A1B0GX56 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRDV1A0A1B0GX56 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRDV1A0A1B0GX56 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
TRDV1A0A1B0GX56 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
TRDV1A0A1B0GX56 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC16.45■□□□□ 0.22
TRDV1A0A1B0GX56 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRDV1A0A1B0GX56 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRDV1A0A1B0GX56 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.45■□□□□ 0.22
TRDV1A0A1B0GX56 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
TRDV1A0A1B0GX56 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRDV1A0A1B0GX56 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRDV1A0A1B0GX56 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRDV1A0A1B0GX56 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
TRDV1A0A1B0GX56 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.45■□□□□ 0.22
TRDV1A0A1B0GX56 REXO1L9P-201ENST00000604264 2108 ntBASIC16.45■□□□□ 0.22
TRDV1A0A1B0GX56 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
TRDV1A0A1B0GX56 AC016769.1-201ENST00000409132 1010 ntBASIC16.45■□□□□ 0.22
TRDV1A0A1B0GX56 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
TRDV1A0A1B0GX56 AC034268.1-201ENST00000441047 882 ntBASIC16.45■□□□□ 0.22
TRDV1A0A1B0GX56 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC16.45■□□□□ 0.22
TRDV1A0A1B0GX56 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
TRDV1A0A1B0GX56 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC16.45■□□□□ 0.22
TRDV1A0A1B0GX56 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRDV1A0A1B0GX56 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRDV1A0A1B0GX56 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRDV1A0A1B0GX56 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
TRDV1A0A1B0GX56 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.45■□□□□ 0.22
TRDV1A0A1B0GX56 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRDV1A0A1B0GX56 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.45■□□□□ 0.22
TRDV1A0A1B0GX56 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRDV1A0A1B0GX56 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRDV1A0A1B0GX56 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
TRDV1A0A1B0GX56 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRDV1A0A1B0GX56 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRDV1A0A1B0GX56 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRDV1A0A1B0GX56 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms