Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV6-4A0A1B0GX49 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
TRBV6-4A0A1B0GX49 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC13.23□□□□□ -0.29
TRBV6-4A0A1B0GX49 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC13.23□□□□□ -0.29
TRBV6-4A0A1B0GX49 ABHD17AP1-201ENST00000358206 933 ntBASIC13.23□□□□□ -0.29
TRBV6-4A0A1B0GX49 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV6-4A0A1B0GX49 PEX7-202ENST00000367756 680 ntTSL 3 BASIC13.23□□□□□ -0.29
TRBV6-4A0A1B0GX49 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
TRBV6-4A0A1B0GX49 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC13.23□□□□□ -0.29
TRBV6-4A0A1B0GX49 MESTP1-201ENST00000404287 994 ntBASIC13.23□□□□□ -0.29
TRBV6-4A0A1B0GX49 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV6-4A0A1B0GX49 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC13.23□□□□□ -0.29
TRBV6-4A0A1B0GX49 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC13.23□□□□□ -0.29
TRBV6-4A0A1B0GX49 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC13.23□□□□□ -0.29
TRBV6-4A0A1B0GX49 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV6-4A0A1B0GX49 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC13.23□□□□□ -0.29
TRBV6-4A0A1B0GX49 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
TRBV6-4A0A1B0GX49 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC13.23□□□□□ -0.29
TRBV6-4A0A1B0GX49 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV6-4A0A1B0GX49 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC13.23□□□□□ -0.29
TRBV6-4A0A1B0GX49 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV6-4A0A1B0GX49 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV6-4A0A1B0GX49 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV6-4A0A1B0GX49 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
TRBV6-4A0A1B0GX49 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC13.23□□□□□ -0.29
TRBV6-4A0A1B0GX49 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV6-4A0A1B0GX49 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
TRBV6-4A0A1B0GX49 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC13.23□□□□□ -0.29
TRBV6-4A0A1B0GX49 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV6-4A0A1B0GX49 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV6-4A0A1B0GX49 AC005082.1-201ENST00000413042 2259 ntBASIC13.23□□□□□ -0.29
TRBV6-4A0A1B0GX49 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV6-4A0A1B0GX49 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV6-4A0A1B0GX49 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV6-4A0A1B0GX49 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC13.22□□□□□ -0.29
TRBV6-4A0A1B0GX49 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC13.22□□□□□ -0.29
TRBV6-4A0A1B0GX49 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC13.22□□□□□ -0.29
TRBV6-4A0A1B0GX49 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV6-4A0A1B0GX49 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC13.22□□□□□ -0.29
TRBV6-4A0A1B0GX49 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV6-4A0A1B0GX49 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV6-4A0A1B0GX49 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV6-4A0A1B0GX49 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV6-4A0A1B0GX49 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
TRBV6-4A0A1B0GX49 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
TRBV6-4A0A1B0GX49 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV6-4A0A1B0GX49 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV6-4A0A1B0GX49 AC098590.1-201ENST00000468126 897 ntBASIC13.22□□□□□ -0.29
TRBV6-4A0A1B0GX49 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV6-4A0A1B0GX49 CA15P1-201ENST00000481698 905 ntBASIC13.22□□□□□ -0.29
TRBV6-4A0A1B0GX49 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC13.22□□□□□ -0.29
TRBV6-4A0A1B0GX49 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC13.22□□□□□ -0.29
TRBV6-4A0A1B0GX49 GRAMD4P8-201ENST00000605465 1115 ntBASIC13.22□□□□□ -0.29
TRBV6-4A0A1B0GX49 DECR2-212ENST00000627716 352 ntTSL 2 BASIC13.22□□□□□ -0.29
TRBV6-4A0A1B0GX49 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV6-4A0A1B0GX49 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC13.22□□□□□ -0.29
TRBV6-4A0A1B0GX49 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV6-4A0A1B0GX49 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV6-4A0A1B0GX49 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC13.22□□□□□ -0.29
TRBV6-4A0A1B0GX49 RCC2P3-201ENST00000418112 1537 ntBASIC13.22□□□□□ -0.29
TRBV6-4A0A1B0GX49 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
TRBV6-4A0A1B0GX49 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV6-4A0A1B0GX49 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC13.22□□□□□ -0.29
TRBV6-4A0A1B0GX49 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
TRBV6-4A0A1B0GX49 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV6-4A0A1B0GX49 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV6-4A0A1B0GX49 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV6-4A0A1B0GX49 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV6-4A0A1B0GX49 AL109659.2-201ENST00000606809 1674 ntBASIC13.21□□□□□ -0.29
TRBV6-4A0A1B0GX49 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV6-4A0A1B0GX49 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC13.21□□□□□ -0.29
TRBV6-4A0A1B0GX49 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV6-4A0A1B0GX49 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV6-4A0A1B0GX49 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC13.21□□□□□ -0.29
TRBV6-4A0A1B0GX49 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC13.21□□□□□ -0.29
TRBV6-4A0A1B0GX49 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV6-4A0A1B0GX49 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV6-4A0A1B0GX49 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC13.21□□□□□ -0.29
TRBV6-4A0A1B0GX49 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV6-4A0A1B0GX49 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC13.21□□□□□ -0.29
TRBV6-4A0A1B0GX49 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV6-4A0A1B0GX49 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV6-4A0A1B0GX49 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV6-4A0A1B0GX49 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV6-4A0A1B0GX49 BAALC-201ENST00000297574 801 ntTSL 3 BASIC13.21□□□□□ -0.29
TRBV6-4A0A1B0GX49 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV6-4A0A1B0GX49 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV6-4A0A1B0GX49 AL355355.2-201ENST00000442321 338 ntBASIC13.21□□□□□ -0.29
TRBV6-4A0A1B0GX49 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV6-4A0A1B0GX49 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
TRBV6-4A0A1B0GX49 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV6-4A0A1B0GX49 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC13.21□□□□□ -0.29
TRBV6-4A0A1B0GX49 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC13.21□□□□□ -0.29
TRBV6-4A0A1B0GX49 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC13.21□□□□□ -0.29
TRBV6-4A0A1B0GX49 SLC25A1P4-201ENST00000567977 778 ntBASIC13.21□□□□□ -0.29
TRBV6-4A0A1B0GX49 GRAP-204ENST00000573099 846 ntTSL 3 BASIC13.21□□□□□ -0.29
TRBV6-4A0A1B0GX49 CYGB-204ENST00000589342 815 ntTSL 3 BASIC13.21□□□□□ -0.29
TRBV6-4A0A1B0GX49 AL049637.2-201ENST00000641778 930 ntBASIC13.21□□□□□ -0.29
TRBV6-4A0A1B0GX49 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC13.21□□□□□ -0.29
TRBV6-4A0A1B0GX49 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms