Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
LINC01558Q9Y6Z2 RARRES2P7-201ENST00000567349 469 ntBASIC9.73□□□□□ -0.85
LINC01558Q9Y6Z2 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC9.73□□□□□ -0.85
LINC01558Q9Y6Z2 MIR2861-201ENST00000636310 90 ntBASIC9.73□□□□□ -0.85
LINC01558Q9Y6Z2 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
LINC01558Q9Y6Z2 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
LINC01558Q9Y6Z2 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC9.73□□□□□ -0.85
LINC01558Q9Y6Z2 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
LINC01558Q9Y6Z2 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC9.73□□□□□ -0.85
LINC01558Q9Y6Z2 STK24-203ENST00000397517 4578 ntTSL 2 BASIC9.73□□□□□ -0.85
LINC01558Q9Y6Z2 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
LINC01558Q9Y6Z2 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC9.73□□□□□ -0.85
LINC01558Q9Y6Z2 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC9.73□□□□□ -0.85
LINC01558Q9Y6Z2 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
LINC01558Q9Y6Z2 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
LINC01558Q9Y6Z2 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
LINC01558Q9Y6Z2 REST-206ENST00000612429 1376 ntTSL 5 BASIC9.73□□□□□ -0.85
LINC01558Q9Y6Z2 REST-207ENST00000616975 1370 ntTSL 5 BASIC9.73□□□□□ -0.85
LINC01558Q9Y6Z2 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
LINC01558Q9Y6Z2 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
LINC01558Q9Y6Z2 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
LINC01558Q9Y6Z2 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
LINC01558Q9Y6Z2 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
LINC01558Q9Y6Z2 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
LINC01558Q9Y6Z2 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
LINC01558Q9Y6Z2 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC9.73□□□□□ -0.85
LINC01558Q9Y6Z2 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC9.73□□□□□ -0.85
LINC01558Q9Y6Z2 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
LINC01558Q9Y6Z2 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
LINC01558Q9Y6Z2 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC9.72□□□□□ -0.85
LINC01558Q9Y6Z2 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC9.72□□□□□ -0.85
LINC01558Q9Y6Z2 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
LINC01558Q9Y6Z2 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
LINC01558Q9Y6Z2 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
LINC01558Q9Y6Z2 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
LINC01558Q9Y6Z2 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
LINC01558Q9Y6Z2 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
LINC01558Q9Y6Z2 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
LINC01558Q9Y6Z2 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
LINC01558Q9Y6Z2 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
LINC01558Q9Y6Z2 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
LINC01558Q9Y6Z2 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC9.72□□□□□ -0.85
LINC01558Q9Y6Z2 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
LINC01558Q9Y6Z2 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
LINC01558Q9Y6Z2 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
LINC01558Q9Y6Z2 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
LINC01558Q9Y6Z2 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
LINC01558Q9Y6Z2 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC9.72□□□□□ -0.85
LINC01558Q9Y6Z2 AC105917.1-201ENST00000506637 2539 ntBASIC9.72□□□□□ -0.85
LINC01558Q9Y6Z2 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
LINC01558Q9Y6Z2 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
LINC01558Q9Y6Z2 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
LINC01558Q9Y6Z2 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
LINC01558Q9Y6Z2 MOB2-207ENST00000614710 705 ntTSL 5 BASIC9.72□□□□□ -0.85
LINC01558Q9Y6Z2 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
LINC01558Q9Y6Z2 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
LINC01558Q9Y6Z2 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
LINC01558Q9Y6Z2 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC9.72□□□□□ -0.85
LINC01558Q9Y6Z2 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
LINC01558Q9Y6Z2 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
LINC01558Q9Y6Z2 REST-210ENST00000638187 1334 ntTSL 5 BASIC9.72□□□□□ -0.85
LINC01558Q9Y6Z2 AC116050.2-201ENST00000612102 1779 ntBASIC9.72□□□□□ -0.85
LINC01558Q9Y6Z2 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
LINC01558Q9Y6Z2 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
LINC01558Q9Y6Z2 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
LINC01558Q9Y6Z2 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
LINC01558Q9Y6Z2 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
LINC01558Q9Y6Z2 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
LINC01558Q9Y6Z2 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
LINC01558Q9Y6Z2 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
LINC01558Q9Y6Z2 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC9.72□□□□□ -0.85
LINC01558Q9Y6Z2 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC9.72□□□□□ -0.85
LINC01558Q9Y6Z2 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
LINC01558Q9Y6Z2 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC9.72□□□□□ -0.85
LINC01558Q9Y6Z2 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC9.72□□□□□ -0.85
LINC01558Q9Y6Z2 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC9.72□□□□□ -0.85
LINC01558Q9Y6Z2 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
LINC01558Q9Y6Z2 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC9.71□□□□□ -0.85
LINC01558Q9Y6Z2 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
LINC01558Q9Y6Z2 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
LINC01558Q9Y6Z2 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
LINC01558Q9Y6Z2 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.85
LINC01558Q9Y6Z2 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
LINC01558Q9Y6Z2 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
LINC01558Q9Y6Z2 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
LINC01558Q9Y6Z2 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
LINC01558Q9Y6Z2 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
LINC01558Q9Y6Z2 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
LINC01558Q9Y6Z2 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC9.71□□□□□ -0.85
LINC01558Q9Y6Z2 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
LINC01558Q9Y6Z2 AC007950.2-201ENST00000615045 2347 ntBASIC9.71□□□□□ -0.85
LINC01558Q9Y6Z2 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
LINC01558Q9Y6Z2 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC9.71□□□□□ -0.85
LINC01558Q9Y6Z2 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
LINC01558Q9Y6Z2 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
LINC01558Q9Y6Z2 POR-209ENST00000439269 1858 ntTSL 2 BASIC9.71□□□□□ -0.85
LINC01558Q9Y6Z2 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.85
LINC01558Q9Y6Z2 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC9.71□□□□□ -0.85
LINC01558Q9Y6Z2 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.86
LINC01558Q9Y6Z2 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC9.71□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms