Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC28.32■■■□□ 2.12
CDC42BPBQ9Y5S2 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
CDC42BPBQ9Y5S2 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
CDC42BPBQ9Y5S2 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC28.32■■■□□ 2.12
CDC42BPBQ9Y5S2 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
CDC42BPBQ9Y5S2 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC28.32■■■□□ 2.12
CDC42BPBQ9Y5S2 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
CDC42BPBQ9Y5S2 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
CDC42BPBQ9Y5S2 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
CDC42BPBQ9Y5S2 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
CDC42BPBQ9Y5S2 GUSBP12-201ENST00000513727 720 ntBASIC28.32■■■□□ 2.12
CDC42BPBQ9Y5S2 TPM1-218ENST00000559281 851 ntTSL 5 BASIC28.32■■■□□ 2.12
CDC42BPBQ9Y5S2 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC28.32■■■□□ 2.12
CDC42BPBQ9Y5S2 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC28.32■■■□□ 2.12
CDC42BPBQ9Y5S2 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC28.32■■■□□ 2.12
CDC42BPBQ9Y5S2 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
CDC42BPBQ9Y5S2 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
CDC42BPBQ9Y5S2 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC28.31■■■□□ 2.12
CDC42BPBQ9Y5S2 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
CDC42BPBQ9Y5S2 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
CDC42BPBQ9Y5S2 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
CDC42BPBQ9Y5S2 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC28.31■■■□□ 2.12
CDC42BPBQ9Y5S2 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
CDC42BPBQ9Y5S2 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC28.31■■■□□ 2.12
CDC42BPBQ9Y5S2 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
CDC42BPBQ9Y5S2 AC148477.8-201ENST00000624298 468 ntBASIC28.31■■■□□ 2.12
CDC42BPBQ9Y5S2 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC28.31■■■□□ 2.12
CDC42BPBQ9Y5S2 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
CDC42BPBQ9Y5S2 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
CDC42BPBQ9Y5S2 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
CDC42BPBQ9Y5S2 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC28.3■■■□□ 2.12
CDC42BPBQ9Y5S2 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC28.3■■■□□ 2.12
CDC42BPBQ9Y5S2 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
CDC42BPBQ9Y5S2 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
CDC42BPBQ9Y5S2 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC28.3■■■□□ 2.12
CDC42BPBQ9Y5S2 AP000593.1-201ENST00000393668 712 ntBASIC28.3■■■□□ 2.12
CDC42BPBQ9Y5S2 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC28.3■■■□□ 2.12
CDC42BPBQ9Y5S2 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC28.3■■■□□ 2.12
CDC42BPBQ9Y5S2 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC28.3■■■□□ 2.12
CDC42BPBQ9Y5S2 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
CDC42BPBQ9Y5S2 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC28.3■■■□□ 2.12
CDC42BPBQ9Y5S2 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC28.3■■■□□ 2.12
CDC42BPBQ9Y5S2 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
CDC42BPBQ9Y5S2 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CDC42BPBQ9Y5S2 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CDC42BPBQ9Y5S2 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC28.29■■■□□ 2.12
CDC42BPBQ9Y5S2 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CDC42BPBQ9Y5S2 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CDC42BPBQ9Y5S2 AL357033.4-201ENST00000617703 1807 ntBASIC28.29■■■□□ 2.12
CDC42BPBQ9Y5S2 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC28.29■■■□□ 2.12
CDC42BPBQ9Y5S2 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
CDC42BPBQ9Y5S2 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CDC42BPBQ9Y5S2 KRT18P67-201ENST00000432816 1264 ntBASIC28.29■■■□□ 2.12
CDC42BPBQ9Y5S2 KRT18P41-201ENST00000518924 1277 ntBASIC28.29■■■□□ 2.12
CDC42BPBQ9Y5S2 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC28.29■■■□□ 2.12
CDC42BPBQ9Y5S2 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC28.29■■■□□ 2.12
CDC42BPBQ9Y5S2 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC28.29■■■□□ 2.12
CDC42BPBQ9Y5S2 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CDC42BPBQ9Y5S2 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC28.29■■■□□ 2.12
CDC42BPBQ9Y5S2 FEM1AP3-201ENST00000403722 1741 ntBASIC28.28■■■□□ 2.12
CDC42BPBQ9Y5S2 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC28.28■■■□□ 2.12
CDC42BPBQ9Y5S2 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC28.28■■■□□ 2.12
CDC42BPBQ9Y5S2 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
CDC42BPBQ9Y5S2 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC28.28■■■□□ 2.12
CDC42BPBQ9Y5S2 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
CDC42BPBQ9Y5S2 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
CDC42BPBQ9Y5S2 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC28.28■■■□□ 2.12
CDC42BPBQ9Y5S2 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
CDC42BPBQ9Y5S2 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC28.28■■■□□ 2.12
CDC42BPBQ9Y5S2 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC28.28■■■□□ 2.12
CDC42BPBQ9Y5S2 AC008608.2-201ENST00000606089 416 ntBASIC28.28■■■□□ 2.12
CDC42BPBQ9Y5S2 AF228730.7-201ENST00000641842 219 ntBASIC28.28■■■□□ 2.12
CDC42BPBQ9Y5S2 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC28.28■■■□□ 2.12
CDC42BPBQ9Y5S2 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
CDC42BPBQ9Y5S2 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC28.28■■■□□ 2.12
CDC42BPBQ9Y5S2 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
CDC42BPBQ9Y5S2 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC28.28■■■□□ 2.12
CDC42BPBQ9Y5S2 FP475955.4-201ENST00000623131 1990 ntBASIC28.28■■■□□ 2.12
CDC42BPBQ9Y5S2 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
CDC42BPBQ9Y5S2 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC28.27■■■□□ 2.12
CDC42BPBQ9Y5S2 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC28.27■■■□□ 2.12
CDC42BPBQ9Y5S2 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
CDC42BPBQ9Y5S2 REEP1-209ENST00000541910 969 ntTSL 2 BASIC28.27■■■□□ 2.12
CDC42BPBQ9Y5S2 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC28.27■■■□□ 2.12
CDC42BPBQ9Y5S2 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC28.27■■■□□ 2.12
CDC42BPBQ9Y5S2 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC28.27■■■□□ 2.12
CDC42BPBQ9Y5S2 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC28.27■■■□□ 2.12
CDC42BPBQ9Y5S2 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
CDC42BPBQ9Y5S2 HEIH-201ENST00000623091 1652 ntBASIC28.27■■■□□ 2.12
CDC42BPBQ9Y5S2 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
CDC42BPBQ9Y5S2 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
CDC42BPBQ9Y5S2 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
CDC42BPBQ9Y5S2 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC28.26■■■□□ 2.12
CDC42BPBQ9Y5S2 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC28.26■■■□□ 2.12
CDC42BPBQ9Y5S2 AL590627.1-203ENST00000421194 1026 ntBASIC28.26■■■□□ 2.12
CDC42BPBQ9Y5S2 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC28.26■■■□□ 2.12
CDC42BPBQ9Y5S2 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC28.26■■■□□ 2.12
CDC42BPBQ9Y5S2 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC28.26■■■□□ 2.12
CDC42BPBQ9Y5S2 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC28.26■■■□□ 2.12
CDC42BPBQ9Y5S2 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms