Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00588Q9Y4M8 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00588Q9Y4M8 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
LINC00588Q9Y4M8 PCED1CP-201ENST00000419887 785 ntBASIC12.84□□□□□ -0.35
LINC00588Q9Y4M8 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00588Q9Y4M8 KRT18P23-201ENST00000435622 1283 ntBASIC12.84□□□□□ -0.35
LINC00588Q9Y4M8 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00588Q9Y4M8 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00588Q9Y4M8 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC12.84□□□□□ -0.35
LINC00588Q9Y4M8 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC12.84□□□□□ -0.35
LINC00588Q9Y4M8 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00588Q9Y4M8 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00588Q9Y4M8 RASA4DP-201ENST00000460726 1199 ntBASIC12.84□□□□□ -0.35
LINC00588Q9Y4M8 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC12.84□□□□□ -0.35
LINC00588Q9Y4M8 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC12.84□□□□□ -0.35
LINC00588Q9Y4M8 FAM86EP-206ENST00000510506 987 ntBASIC12.84□□□□□ -0.35
LINC00588Q9Y4M8 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC12.84□□□□□ -0.35
LINC00588Q9Y4M8 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC12.84□□□□□ -0.35
LINC00588Q9Y4M8 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC12.84□□□□□ -0.35
LINC00588Q9Y4M8 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC12.84□□□□□ -0.35
LINC00588Q9Y4M8 DFFB-212ENST00000625756 649 ntTSL 5 BASIC12.84□□□□□ -0.35
LINC00588Q9Y4M8 LINC01311-201ENST00000565162 1445 ntBASIC12.84□□□□□ -0.35
LINC00588Q9Y4M8 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00588Q9Y4M8 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC12.84□□□□□ -0.35
LINC00588Q9Y4M8 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00588Q9Y4M8 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00588Q9Y4M8 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC12.84□□□□□ -0.35
LINC00588Q9Y4M8 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00588Q9Y4M8 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00588Q9Y4M8 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC12.84□□□□□ -0.35
LINC00588Q9Y4M8 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00588Q9Y4M8 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
LINC00588Q9Y4M8 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
LINC00588Q9Y4M8 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
LINC00588Q9Y4M8 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00588Q9Y4M8 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
LINC00588Q9Y4M8 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00588Q9Y4M8 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00588Q9Y4M8 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC12.83□□□□□ -0.36
LINC00588Q9Y4M8 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
LINC00588Q9Y4M8 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00588Q9Y4M8 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
LINC00588Q9Y4M8 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00588Q9Y4M8 MIR564-202ENST00000385049 94 ntBASIC12.83□□□□□ -0.36
LINC00588Q9Y4M8 UPK3BP1-201ENST00000428678 509 ntBASIC12.83□□□□□ -0.36
LINC00588Q9Y4M8 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC12.83□□□□□ -0.36
LINC00588Q9Y4M8 ELP6-205ENST00000439305 880 ntTSL 2 BASIC12.83□□□□□ -0.36
LINC00588Q9Y4M8 SEC1P-202ENST00000473944 940 ntBASIC12.83□□□□□ -0.36
LINC00588Q9Y4M8 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00588Q9Y4M8 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC12.83□□□□□ -0.36
LINC00588Q9Y4M8 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00588Q9Y4M8 ZNF444P1-201ENST00000559497 298 ntBASIC12.83□□□□□ -0.36
LINC00588Q9Y4M8 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC12.83□□□□□ -0.36
LINC00588Q9Y4M8 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
LINC00588Q9Y4M8 FGF14-AS2-201ENST00000606448 1074 ntBASIC12.83□□□□□ -0.36
LINC00588Q9Y4M8 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00588Q9Y4M8 AP000550.4-202ENST00000639755 178 ntBASIC12.83□□□□□ -0.36
LINC00588Q9Y4M8 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC12.83□□□□□ -0.36
LINC00588Q9Y4M8 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
LINC00588Q9Y4M8 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
LINC00588Q9Y4M8 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00588Q9Y4M8 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC12.83□□□□□ -0.36
LINC00588Q9Y4M8 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00588Q9Y4M8 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00588Q9Y4M8 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC12.83□□□□□ -0.36
LINC00588Q9Y4M8 AC005332.7-201ENST00000614046 2005 ntBASIC12.83□□□□□ -0.36
LINC00588Q9Y4M8 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00588Q9Y4M8 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00588Q9Y4M8 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC12.83□□□□□ -0.36
LINC00588Q9Y4M8 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00588Q9Y4M8 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00588Q9Y4M8 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC12.82□□□□□ -0.36
LINC00588Q9Y4M8 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00588Q9Y4M8 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00588Q9Y4M8 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00588Q9Y4M8 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC12.82□□□□□ -0.36
LINC00588Q9Y4M8 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC12.82□□□□□ -0.36
LINC00588Q9Y4M8 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
LINC00588Q9Y4M8 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00588Q9Y4M8 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00588Q9Y4M8 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00588Q9Y4M8 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00588Q9Y4M8 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00588Q9Y4M8 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00588Q9Y4M8 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC12.82□□□□□ -0.36
LINC00588Q9Y4M8 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00588Q9Y4M8 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
LINC00588Q9Y4M8 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
LINC00588Q9Y4M8 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00588Q9Y4M8 LY6E-213ENST00000522528 606 ntTSL 3 BASIC12.82□□□□□ -0.36
LINC00588Q9Y4M8 VENTXP5-201ENST00000523979 775 ntBASIC12.82□□□□□ -0.36
LINC00588Q9Y4M8 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC12.82□□□□□ -0.36
LINC00588Q9Y4M8 AC083849.1-201ENST00000615227 514 ntBASIC12.82□□□□□ -0.36
LINC00588Q9Y4M8 HYMAI.1-201ENST00000620949 238 ntBASIC12.82□□□□□ -0.36
LINC00588Q9Y4M8 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC12.82□□□□□ -0.36
LINC00588Q9Y4M8 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
LINC00588Q9Y4M8 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00588Q9Y4M8 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
LINC00588Q9Y4M8 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00588Q9Y4M8 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms