Protein–RNA interactions for Protein: Q9Y3Q4

HCN4, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN4Q9Y3Q4 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HCN4Q9Y3Q4 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC19.18■□□□□ 0.66
HCN4Q9Y3Q4 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HCN4Q9Y3Q4 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HCN4Q9Y3Q4 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
HCN4Q9Y3Q4 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
HCN4Q9Y3Q4 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC19.18■□□□□ 0.66
HCN4Q9Y3Q4 COA5-202ENST00000409997 557 ntTSL 4 BASIC19.18■□□□□ 0.66
HCN4Q9Y3Q4 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.18■□□□□ 0.66
HCN4Q9Y3Q4 PON3-203ENST00000427422 894 ntTSL 3 BASIC19.18■□□□□ 0.66
HCN4Q9Y3Q4 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HCN4Q9Y3Q4 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
HCN4Q9Y3Q4 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC19.18■□□□□ 0.66
HCN4Q9Y3Q4 PRR29-209ENST00000582540 967 ntTSL 2 BASIC19.18■□□□□ 0.66
HCN4Q9Y3Q4 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC19.18■□□□□ 0.66
HCN4Q9Y3Q4 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HCN4Q9Y3Q4 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HCN4Q9Y3Q4 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
HCN4Q9Y3Q4 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HCN4Q9Y3Q4 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HCN4Q9Y3Q4 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC19.18■□□□□ 0.66
HCN4Q9Y3Q4 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HCN4Q9Y3Q4 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.18■□□□□ 0.66
HCN4Q9Y3Q4 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.18■□□□□ 0.66
HCN4Q9Y3Q4 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.18■□□□□ 0.66
HCN4Q9Y3Q4 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.18■□□□□ 0.66
HCN4Q9Y3Q4 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HCN4Q9Y3Q4 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HCN4Q9Y3Q4 KRT8P17-201ENST00000453110 1448 ntBASIC19.17■□□□□ 0.66
HCN4Q9Y3Q4 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.17■□□□□ 0.66
HCN4Q9Y3Q4 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HCN4Q9Y3Q4 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HCN4Q9Y3Q4 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HCN4Q9Y3Q4 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HCN4Q9Y3Q4 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
HCN4Q9Y3Q4 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HCN4Q9Y3Q4 RPS2P28-201ENST00000314255 741 ntBASIC19.17■□□□□ 0.66
HCN4Q9Y3Q4 MIR662-201ENST00000384847 95 ntBASIC19.17■□□□□ 0.66
HCN4Q9Y3Q4 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HCN4Q9Y3Q4 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC19.17■□□□□ 0.66
HCN4Q9Y3Q4 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
HCN4Q9Y3Q4 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
HCN4Q9Y3Q4 NMU-202ENST00000505262 693 ntTSL 3 BASIC19.17■□□□□ 0.66
HCN4Q9Y3Q4 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
HCN4Q9Y3Q4 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC19.17■□□□□ 0.66
HCN4Q9Y3Q4 ORC5-208ENST00000626700 344 ntTSL 3 BASIC19.17■□□□□ 0.66
HCN4Q9Y3Q4 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
HCN4Q9Y3Q4 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
HCN4Q9Y3Q4 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HCN4Q9Y3Q4 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
HCN4Q9Y3Q4 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HCN4Q9Y3Q4 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
HCN4Q9Y3Q4 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HCN4Q9Y3Q4 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.16■□□□□ 0.66
HCN4Q9Y3Q4 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
HCN4Q9Y3Q4 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
HCN4Q9Y3Q4 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HCN4Q9Y3Q4 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HCN4Q9Y3Q4 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.16■□□□□ 0.66
HCN4Q9Y3Q4 MIR770-201ENST00000390219 98 ntBASIC19.16■□□□□ 0.66
HCN4Q9Y3Q4 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
HCN4Q9Y3Q4 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC19.16■□□□□ 0.66
HCN4Q9Y3Q4 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.16■□□□□ 0.66
HCN4Q9Y3Q4 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC19.16■□□□□ 0.66
HCN4Q9Y3Q4 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
HCN4Q9Y3Q4 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HCN4Q9Y3Q4 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HCN4Q9Y3Q4 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
HCN4Q9Y3Q4 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HCN4Q9Y3Q4 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HCN4Q9Y3Q4 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HCN4Q9Y3Q4 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HCN4Q9Y3Q4 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.16■□□□□ 0.66
HCN4Q9Y3Q4 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
HCN4Q9Y3Q4 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HCN4Q9Y3Q4 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
HCN4Q9Y3Q4 AC104109.2-201ENST00000602919 1418 ntBASIC19.16■□□□□ 0.66
HCN4Q9Y3Q4 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
HCN4Q9Y3Q4 AIRN-201ENST00000601203 4374 ntBASIC19.16■□□□□ 0.66
HCN4Q9Y3Q4 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
HCN4Q9Y3Q4 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HCN4Q9Y3Q4 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HCN4Q9Y3Q4 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HCN4Q9Y3Q4 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
HCN4Q9Y3Q4 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.15■□□□□ 0.66
HCN4Q9Y3Q4 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HCN4Q9Y3Q4 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HCN4Q9Y3Q4 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HCN4Q9Y3Q4 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HCN4Q9Y3Q4 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
HCN4Q9Y3Q4 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC19.15■□□□□ 0.66
HCN4Q9Y3Q4 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.15■□□□□ 0.66
HCN4Q9Y3Q4 PNMT-202ENST00000394246 821 ntTSL 2 BASIC19.15■□□□□ 0.66
HCN4Q9Y3Q4 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HCN4Q9Y3Q4 AC211486.1-202ENST00000416371 468 ntBASIC19.15■□□□□ 0.66
HCN4Q9Y3Q4 HLA-F-220ENST00000434407 884 ntBASIC19.15■□□□□ 0.66
HCN4Q9Y3Q4 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC19.15■□□□□ 0.66
HCN4Q9Y3Q4 VENTXP7-201ENST00000475503 772 ntBASIC19.15■□□□□ 0.66
HCN4Q9Y3Q4 AC211476.1-201ENST00000503899 468 ntBASIC19.15■□□□□ 0.66
HCN4Q9Y3Q4 AL160286.2-201ENST00000567150 934 ntBASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms