Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NCKAP1Q9Y2A7 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
NCKAP1Q9Y2A7 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
NCKAP1Q9Y2A7 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.78■□□□□ 0.6
NCKAP1Q9Y2A7 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NCKAP1Q9Y2A7 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.78■□□□□ 0.6
NCKAP1Q9Y2A7 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.78■□□□□ 0.6
NCKAP1Q9Y2A7 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.78■□□□□ 0.6
NCKAP1Q9Y2A7 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NCKAP1Q9Y2A7 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.78■□□□□ 0.6
NCKAP1Q9Y2A7 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.78■□□□□ 0.6
NCKAP1Q9Y2A7 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NCKAP1Q9Y2A7 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
NCKAP1Q9Y2A7 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.78■□□□□ 0.6
NCKAP1Q9Y2A7 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
NCKAP1Q9Y2A7 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NCKAP1Q9Y2A7 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NCKAP1Q9Y2A7 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
NCKAP1Q9Y2A7 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NCKAP1Q9Y2A7 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.77■□□□□ 0.6
NCKAP1Q9Y2A7 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.77■□□□□ 0.6
NCKAP1Q9Y2A7 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
NCKAP1Q9Y2A7 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
NCKAP1Q9Y2A7 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NCKAP1Q9Y2A7 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NCKAP1Q9Y2A7 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NCKAP1Q9Y2A7 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NCKAP1Q9Y2A7 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
NCKAP1Q9Y2A7 KRT18P23-201ENST00000435622 1283 ntBASIC18.77■□□□□ 0.6
NCKAP1Q9Y2A7 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.77■□□□□ 0.6
NCKAP1Q9Y2A7 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.77■□□□□ 0.6
NCKAP1Q9Y2A7 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.77■□□□□ 0.6
NCKAP1Q9Y2A7 KRT126P-201ENST00000549467 1181 ntBASIC18.77■□□□□ 0.6
NCKAP1Q9Y2A7 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
NCKAP1Q9Y2A7 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.77■□□□□ 0.6
NCKAP1Q9Y2A7 PCDHAC2-203ENST00000615316 3011 ntBASIC18.77■□□□□ 0.6
NCKAP1Q9Y2A7 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NCKAP1Q9Y2A7 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.77■□□□□ 0.6
NCKAP1Q9Y2A7 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NCKAP1Q9Y2A7 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
NCKAP1Q9Y2A7 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
NCKAP1Q9Y2A7 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
NCKAP1Q9Y2A7 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
NCKAP1Q9Y2A7 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
NCKAP1Q9Y2A7 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.77■□□□□ 0.59
NCKAP1Q9Y2A7 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NCKAP1Q9Y2A7 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.76■□□□□ 0.59
NCKAP1Q9Y2A7 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NCKAP1Q9Y2A7 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
NCKAP1Q9Y2A7 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NCKAP1Q9Y2A7 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NCKAP1Q9Y2A7 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.76■□□□□ 0.59
NCKAP1Q9Y2A7 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.76■□□□□ 0.59
NCKAP1Q9Y2A7 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NCKAP1Q9Y2A7 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
NCKAP1Q9Y2A7 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
NCKAP1Q9Y2A7 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
NCKAP1Q9Y2A7 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.76■□□□□ 0.59
NCKAP1Q9Y2A7 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.76■□□□□ 0.59
NCKAP1Q9Y2A7 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.76■□□□□ 0.59
NCKAP1Q9Y2A7 MIR3917-201ENST00000580971 93 ntBASIC18.76■□□□□ 0.59
NCKAP1Q9Y2A7 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
NCKAP1Q9Y2A7 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.76■□□□□ 0.59
NCKAP1Q9Y2A7 AL157888.1-201ENST00000631930 593 ntBASIC18.76■□□□□ 0.59
NCKAP1Q9Y2A7 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
NCKAP1Q9Y2A7 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NCKAP1Q9Y2A7 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
NCKAP1Q9Y2A7 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
NCKAP1Q9Y2A7 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NCKAP1Q9Y2A7 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NCKAP1Q9Y2A7 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
NCKAP1Q9Y2A7 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
NCKAP1Q9Y2A7 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
NCKAP1Q9Y2A7 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NCKAP1Q9Y2A7 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NCKAP1Q9Y2A7 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.75■□□□□ 0.59
NCKAP1Q9Y2A7 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
NCKAP1Q9Y2A7 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.75■□□□□ 0.59
NCKAP1Q9Y2A7 AC008556.1-201ENST00000610908 2040 ntBASIC18.75■□□□□ 0.59
NCKAP1Q9Y2A7 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
NCKAP1Q9Y2A7 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
NCKAP1Q9Y2A7 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NCKAP1Q9Y2A7 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NCKAP1Q9Y2A7 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NCKAP1Q9Y2A7 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.75■□□□□ 0.59
NCKAP1Q9Y2A7 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.75■□□□□ 0.59
NCKAP1Q9Y2A7 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
NCKAP1Q9Y2A7 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.75■□□□□ 0.59
NCKAP1Q9Y2A7 SPDYE13P-201ENST00000445314 798 ntBASIC18.75■□□□□ 0.59
NCKAP1Q9Y2A7 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.75■□□□□ 0.59
NCKAP1Q9Y2A7 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.75■□□□□ 0.59
NCKAP1Q9Y2A7 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.75■□□□□ 0.59
NCKAP1Q9Y2A7 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NCKAP1Q9Y2A7 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NCKAP1Q9Y2A7 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
NCKAP1Q9Y2A7 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NCKAP1Q9Y2A7 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
NCKAP1Q9Y2A7 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.74■□□□□ 0.59
NCKAP1Q9Y2A7 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NCKAP1Q9Y2A7 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms