Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC28.92■■■□□ 2.22
CDK11AQ9UQ88 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC28.92■■■□□ 2.22
CDK11AQ9UQ88 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
CDK11AQ9UQ88 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC28.92■■■□□ 2.22
CDK11AQ9UQ88 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC28.92■■■□□ 2.22
CDK11AQ9UQ88 IGHV3-47-201ENST00000425060 335 ntBASIC28.92■■■□□ 2.22
CDK11AQ9UQ88 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC28.92■■■□□ 2.22
CDK11AQ9UQ88 RN7SL606P-201ENST00000472779 293 ntBASIC28.92■■■□□ 2.22
CDK11AQ9UQ88 GUSBP12-201ENST00000513727 720 ntBASIC28.92■■■□□ 2.22
CDK11AQ9UQ88 AC009065.1-201ENST00000564055 1225 ntBASIC28.92■■■□□ 2.22
CDK11AQ9UQ88 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC28.92■■■□□ 2.22
CDK11AQ9UQ88 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
CDK11AQ9UQ88 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC28.92■■■□□ 2.22
CDK11AQ9UQ88 AC138894.3-201ENST00000603787 634 ntBASIC28.92■■■□□ 2.22
CDK11AQ9UQ88 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC28.92■■■□□ 2.22
CDK11AQ9UQ88 LINC00167-201ENST00000530583 1419 ntBASIC28.92■■■□□ 2.22
CDK11AQ9UQ88 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC28.92■■■□□ 2.22
CDK11AQ9UQ88 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
CDK11AQ9UQ88 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC28.92■■■□□ 2.22
CDK11AQ9UQ88 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
CDK11AQ9UQ88 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC28.92■■■□□ 2.22
CDK11AQ9UQ88 IRX1P1-201ENST00000438849 1838 ntBASIC28.92■■■□□ 2.22
CDK11AQ9UQ88 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC28.92■■■□□ 2.22
CDK11AQ9UQ88 KRT89P-201ENST00000620027 1478 ntBASIC28.91■■■□□ 2.22
CDK11AQ9UQ88 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC28.91■■■□□ 2.22
CDK11AQ9UQ88 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC28.91■■■□□ 2.22
CDK11AQ9UQ88 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC28.91■■■□□ 2.22
CDK11AQ9UQ88 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
CDK11AQ9UQ88 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC28.91■■■□□ 2.22
CDK11AQ9UQ88 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC28.91■■■□□ 2.22
CDK11AQ9UQ88 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
CDK11AQ9UQ88 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
CDK11AQ9UQ88 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC28.91■■■□□ 2.22
CDK11AQ9UQ88 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC28.91■■■□□ 2.22
CDK11AQ9UQ88 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC28.91■■■□□ 2.22
CDK11AQ9UQ88 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
CDK11AQ9UQ88 AL662844.1-201ENST00000546340 181 ntBASIC28.91■■■□□ 2.22
CDK11AQ9UQ88 AL121912.1-201ENST00000603683 238 ntBASIC28.91■■■□□ 2.22
CDK11AQ9UQ88 AL353801.3-201ENST00000609898 542 ntBASIC28.91■■■□□ 2.22
CDK11AQ9UQ88 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
CDK11AQ9UQ88 AL592071.1-201ENST00000611956 408 ntBASIC28.91■■■□□ 2.22
CDK11AQ9UQ88 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC28.91■■■□□ 2.22
CDK11AQ9UQ88 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
CDK11AQ9UQ88 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
CDK11AQ9UQ88 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC28.91■■■□□ 2.22
CDK11AQ9UQ88 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC28.91■■■□□ 2.22
CDK11AQ9UQ88 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
CDK11AQ9UQ88 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC28.91■■■□□ 2.22
CDK11AQ9UQ88 AL157384.1-201ENST00000445995 2473 ntBASIC28.91■■■□□ 2.22
CDK11AQ9UQ88 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC28.9■■■□□ 2.22
CDK11AQ9UQ88 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC28.9■■■□□ 2.22
CDK11AQ9UQ88 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC28.9■■■□□ 2.22
CDK11AQ9UQ88 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC28.9■■■□□ 2.22
CDK11AQ9UQ88 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC28.9■■■□□ 2.22
CDK11AQ9UQ88 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
CDK11AQ9UQ88 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC28.9■■■□□ 2.22
CDK11AQ9UQ88 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC28.9■■■□□ 2.22
CDK11AQ9UQ88 REEP1-209ENST00000541910 969 ntTSL 2 BASIC28.9■■■□□ 2.22
CDK11AQ9UQ88 SLC25A6P4-201ENST00000586535 553 ntBASIC28.9■■■□□ 2.22
CDK11AQ9UQ88 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC28.9■■■□□ 2.22
CDK11AQ9UQ88 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC28.9■■■□□ 2.22
CDK11AQ9UQ88 AC099336.1-202ENST00000602961 463 ntBASIC28.9■■■□□ 2.22
CDK11AQ9UQ88 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC28.9■■■□□ 2.22
CDK11AQ9UQ88 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC28.9■■■□□ 2.22
CDK11AQ9UQ88 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC28.9■■■□□ 2.22
CDK11AQ9UQ88 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC28.89■■■□□ 2.22
CDK11AQ9UQ88 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC28.89■■■□□ 2.22
CDK11AQ9UQ88 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC28.89■■■□□ 2.22
CDK11AQ9UQ88 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
CDK11AQ9UQ88 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
CDK11AQ9UQ88 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC28.89■■■□□ 2.22
CDK11AQ9UQ88 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC28.89■■■□□ 2.22
CDK11AQ9UQ88 DFFB-203ENST00000341385 572 ntTSL 5 BASIC28.89■■■□□ 2.22
CDK11AQ9UQ88 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC28.89■■■□□ 2.22
CDK11AQ9UQ88 PPOX-214ENST00000535223 664 ntTSL 3 BASIC28.89■■■□□ 2.22
CDK11AQ9UQ88 CALM3-211ENST00000598871 561 ntTSL 4 BASIC28.89■■■□□ 2.22
CDK11AQ9UQ88 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC28.89■■■□□ 2.22
CDK11AQ9UQ88 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC28.89■■■□□ 2.22
CDK11AQ9UQ88 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
CDK11AQ9UQ88 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC28.89■■■□□ 2.22
CDK11AQ9UQ88 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC28.89■■■□□ 2.22
CDK11AQ9UQ88 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC28.89■■■□□ 2.21
CDK11AQ9UQ88 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.21
CDK11AQ9UQ88 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC28.89■■■□□ 2.21
CDK11AQ9UQ88 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC28.89■■■□□ 2.21
CDK11AQ9UQ88 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC28.89■■■□□ 2.21
CDK11AQ9UQ88 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC28.88■■■□□ 2.21
CDK11AQ9UQ88 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC28.88■■■□□ 2.21
CDK11AQ9UQ88 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC28.88■■■□□ 2.21
CDK11AQ9UQ88 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
CDK11AQ9UQ88 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
CDK11AQ9UQ88 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC28.88■■■□□ 2.21
CDK11AQ9UQ88 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
CDK11AQ9UQ88 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC28.88■■■□□ 2.21
CDK11AQ9UQ88 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
CDK11AQ9UQ88 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC28.88■■■□□ 2.21
CDK11AQ9UQ88 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
CDK11AQ9UQ88 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC28.88■■■□□ 2.21
CDK11AQ9UQ88 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
CDK11AQ9UQ88 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC28.88■■■□□ 2.21
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms