Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
NPIPA1Q9UND3 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NPIPA1Q9UND3 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NPIPA1Q9UND3 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.29■□□□□ 0.36
NPIPA1Q9UND3 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.29■□□□□ 0.36
NPIPA1Q9UND3 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.29■□□□□ 0.36
NPIPA1Q9UND3 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NPIPA1Q9UND3 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.29■□□□□ 0.36
NPIPA1Q9UND3 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.29■□□□□ 0.36
NPIPA1Q9UND3 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
NPIPA1Q9UND3 MYC-208ENST00000641036 567 ntBASIC17.29■□□□□ 0.36
NPIPA1Q9UND3 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NPIPA1Q9UND3 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
NPIPA1Q9UND3 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
NPIPA1Q9UND3 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.29■□□□□ 0.36
NPIPA1Q9UND3 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NPIPA1Q9UND3 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.29■□□□□ 0.36
NPIPA1Q9UND3 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.29■□□□□ 0.36
NPIPA1Q9UND3 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NPIPA1Q9UND3 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
NPIPA1Q9UND3 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NPIPA1Q9UND3 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.29■□□□□ 0.36
NPIPA1Q9UND3 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.28■□□□□ 0.36
NPIPA1Q9UND3 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NPIPA1Q9UND3 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPIPA1Q9UND3 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPIPA1Q9UND3 BX323043.1-201ENST00000641006 1765 ntBASIC17.28■□□□□ 0.36
NPIPA1Q9UND3 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPIPA1Q9UND3 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPIPA1Q9UND3 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPIPA1Q9UND3 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPIPA1Q9UND3 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
NPIPA1Q9UND3 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPIPA1Q9UND3 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPIPA1Q9UND3 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.28■□□□□ 0.36
NPIPA1Q9UND3 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NPIPA1Q9UND3 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NPIPA1Q9UND3 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.28■□□□□ 0.36
NPIPA1Q9UND3 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPIPA1Q9UND3 AL359075.1-203ENST00000462729 1002 ntBASIC17.28■□□□□ 0.36
NPIPA1Q9UND3 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.28■□□□□ 0.36
NPIPA1Q9UND3 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.28■□□□□ 0.36
NPIPA1Q9UND3 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPIPA1Q9UND3 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.28■□□□□ 0.36
NPIPA1Q9UND3 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.28■□□□□ 0.36
NPIPA1Q9UND3 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPIPA1Q9UND3 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPIPA1Q9UND3 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPIPA1Q9UND3 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPIPA1Q9UND3 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
NPIPA1Q9UND3 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPIPA1Q9UND3 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPIPA1Q9UND3 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPIPA1Q9UND3 AC104417.2-201ENST00000562989 1793 ntBASIC17.28■□□□□ 0.36
NPIPA1Q9UND3 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPIPA1Q9UND3 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.28■□□□□ 0.36
NPIPA1Q9UND3 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NPIPA1Q9UND3 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.27■□□□□ 0.36
NPIPA1Q9UND3 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NPIPA1Q9UND3 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.27■□□□□ 0.36
NPIPA1Q9UND3 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.27■□□□□ 0.36
NPIPA1Q9UND3 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NPIPA1Q9UND3 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NPIPA1Q9UND3 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NPIPA1Q9UND3 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NPIPA1Q9UND3 HOMER2P1-201ENST00000455653 964 ntBASIC17.27■□□□□ 0.36
NPIPA1Q9UND3 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.27■□□□□ 0.36
NPIPA1Q9UND3 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.27■□□□□ 0.36
NPIPA1Q9UND3 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.27■□□□□ 0.36
NPIPA1Q9UND3 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.27■□□□□ 0.36
NPIPA1Q9UND3 AL441883.1-201ENST00000566170 1045 ntBASIC17.27■□□□□ 0.36
NPIPA1Q9UND3 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
NPIPA1Q9UND3 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
NPIPA1Q9UND3 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NPIPA1Q9UND3 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.27■□□□□ 0.36
NPIPA1Q9UND3 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
NPIPA1Q9UND3 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
NPIPA1Q9UND3 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
NPIPA1Q9UND3 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NPIPA1Q9UND3 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
NPIPA1Q9UND3 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.27■□□□□ 0.35
NPIPA1Q9UND3 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.35
NPIPA1Q9UND3 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
NPIPA1Q9UND3 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.27■□□□□ 0.35
NPIPA1Q9UND3 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
NPIPA1Q9UND3 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.27■□□□□ 0.35
NPIPA1Q9UND3 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.26■□□□□ 0.35
NPIPA1Q9UND3 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPIPA1Q9UND3 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
NPIPA1Q9UND3 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPIPA1Q9UND3 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.26■□□□□ 0.35
NPIPA1Q9UND3 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.26■□□□□ 0.35
NPIPA1Q9UND3 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPIPA1Q9UND3 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.26■□□□□ 0.35
NPIPA1Q9UND3 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.26■□□□□ 0.35
NPIPA1Q9UND3 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
NPIPA1Q9UND3 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPIPA1Q9UND3 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.26■□□□□ 0.35
NPIPA1Q9UND3 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.26■□□□□ 0.35
NPIPA1Q9UND3 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms