Protein–RNA interactions for Protein: Q9UK58

CCNL1, Cyclin-L1, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1Q9UK58 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCNL1Q9UK58 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC23.82■■□□□ 1.4
CCNL1Q9UK58 PIN1-206ENST00000587625 878 ntTSL 2 BASIC23.82■■□□□ 1.4
CCNL1Q9UK58 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC23.82■■□□□ 1.4
CCNL1Q9UK58 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC23.82■■□□□ 1.4
CCNL1Q9UK58 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCNL1Q9UK58 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC23.82■■□□□ 1.4
CCNL1Q9UK58 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
CCNL1Q9UK58 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCNL1Q9UK58 PALM-208ENST00000592155 2272 ntTSL 4 BASIC23.81■■□□□ 1.4
CCNL1Q9UK58 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCNL1Q9UK58 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC23.81■■□□□ 1.4
CCNL1Q9UK58 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
CCNL1Q9UK58 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC23.81■■□□□ 1.4
CCNL1Q9UK58 AC073648.2-201ENST00000510116 352 ntBASIC23.81■■□□□ 1.4
CCNL1Q9UK58 AC096582.2-201ENST00000510860 516 ntBASIC23.81■■□□□ 1.4
CCNL1Q9UK58 REEP1-209ENST00000541910 969 ntTSL 2 BASIC23.81■■□□□ 1.4
CCNL1Q9UK58 AC139887.3-201ENST00000568585 713 ntBASIC23.81■■□□□ 1.4
CCNL1Q9UK58 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CCNL1Q9UK58 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CCNL1Q9UK58 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
CCNL1Q9UK58 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCNL1Q9UK58 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CCNL1Q9UK58 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC23.81■■□□□ 1.4
CCNL1Q9UK58 GABARAPL3-202ENST00000624044 1851 ntBASIC23.81■■□□□ 1.4
CCNL1Q9UK58 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC23.81■■□□□ 1.4
CCNL1Q9UK58 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC23.81■■□□□ 1.4
CCNL1Q9UK58 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC23.8■■□□□ 1.4
CCNL1Q9UK58 TREX1-205ENST00000625293 1783 ntBASIC23.8■■□□□ 1.4
CCNL1Q9UK58 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCNL1Q9UK58 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
CCNL1Q9UK58 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCNL1Q9UK58 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CCNL1Q9UK58 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCNL1Q9UK58 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCNL1Q9UK58 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCNL1Q9UK58 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCNL1Q9UK58 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC23.8■■□□□ 1.4
CCNL1Q9UK58 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC23.8■■□□□ 1.4
CCNL1Q9UK58 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC23.8■■□□□ 1.4
CCNL1Q9UK58 LITAF-211ENST00000572255 516 ntTSL 4 BASIC23.8■■□□□ 1.4
CCNL1Q9UK58 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC23.8■■□□□ 1.4
CCNL1Q9UK58 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC23.8■■□□□ 1.4
CCNL1Q9UK58 Z82202.1-201ENST00000623446 1880 ntBASIC23.8■■□□□ 1.4
CCNL1Q9UK58 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CCNL1Q9UK58 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
CCNL1Q9UK58 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC23.79■■□□□ 1.4
CCNL1Q9UK58 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCNL1Q9UK58 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCNL1Q9UK58 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCNL1Q9UK58 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CCNL1Q9UK58 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCNL1Q9UK58 TCF3P1-201ENST00000423021 1937 ntBASIC23.79■■□□□ 1.4
CCNL1Q9UK58 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC23.79■■□□□ 1.4
CCNL1Q9UK58 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCNL1Q9UK58 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCNL1Q9UK58 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC23.79■■□□□ 1.4
CCNL1Q9UK58 AC132008.2-207ENST00000454517 770 ntBASIC23.79■■□□□ 1.4
CCNL1Q9UK58 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
CCNL1Q9UK58 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC23.79■■□□□ 1.4
CCNL1Q9UK58 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCNL1Q9UK58 AC114341.1-201ENST00000618070 349 ntBASIC23.79■■□□□ 1.4
CCNL1Q9UK58 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCNL1Q9UK58 KRT89P-201ENST00000620027 1478 ntBASIC23.79■■□□□ 1.4
CCNL1Q9UK58 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
CCNL1Q9UK58 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
CCNL1Q9UK58 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC23.79■■□□□ 1.4
CCNL1Q9UK58 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC23.78■■□□□ 1.4
CCNL1Q9UK58 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCNL1Q9UK58 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCNL1Q9UK58 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
CCNL1Q9UK58 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC23.78■■□□□ 1.4
CCNL1Q9UK58 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCNL1Q9UK58 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC23.78■■□□□ 1.4
CCNL1Q9UK58 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCNL1Q9UK58 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCNL1Q9UK58 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC23.78■■□□□ 1.4
CCNL1Q9UK58 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC23.78■■□□□ 1.4
CCNL1Q9UK58 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC23.78■■□□□ 1.4
CCNL1Q9UK58 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CCNL1Q9UK58 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC23.78■■□□□ 1.4
CCNL1Q9UK58 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC23.78■■□□□ 1.4
CCNL1Q9UK58 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC23.78■■□□□ 1.4
CCNL1Q9UK58 KRT8P32-201ENST00000512863 1461 ntBASIC23.78■■□□□ 1.4
CCNL1Q9UK58 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
CCNL1Q9UK58 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCNL1Q9UK58 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC23.78■■□□□ 1.4
CCNL1Q9UK58 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCNL1Q9UK58 CYP51A1P1-201ENST00000492267 1507 ntBASIC23.78■■□□□ 1.4
CCNL1Q9UK58 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC23.78■■□□□ 1.4
CCNL1Q9UK58 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCNL1Q9UK58 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC23.78■■□□□ 1.4
CCNL1Q9UK58 ZNF259P1-201ENST00000407656 1365 ntBASIC23.78■■□□□ 1.4
CCNL1Q9UK58 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CCNL1Q9UK58 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCNL1Q9UK58 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCNL1Q9UK58 TEX21P-204ENST00000641479 1693 ntBASIC23.77■■□□□ 1.4
CCNL1Q9UK58 TP73-202ENST00000354437 2140 ntTSL 5 BASIC23.77■■□□□ 1.4
CCNL1Q9UK58 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCNL1Q9UK58 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms