Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTSFQ9UBX1 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CTSFQ9UBX1 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.64■□□□□ 0.42
CTSFQ9UBX1 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
CTSFQ9UBX1 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTSFQ9UBX1 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTSFQ9UBX1 KRT8P32-201ENST00000512863 1461 ntBASIC17.64■□□□□ 0.41
CTSFQ9UBX1 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTSFQ9UBX1 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.64■□□□□ 0.41
CTSFQ9UBX1 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTSFQ9UBX1 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTSFQ9UBX1 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.64■□□□□ 0.41
CTSFQ9UBX1 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTSFQ9UBX1 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.64■□□□□ 0.41
CTSFQ9UBX1 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.64■□□□□ 0.41
CTSFQ9UBX1 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.64■□□□□ 0.41
CTSFQ9UBX1 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.64■□□□□ 0.41
CTSFQ9UBX1 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CTSFQ9UBX1 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTSFQ9UBX1 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTSFQ9UBX1 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.64■□□□□ 0.41
CTSFQ9UBX1 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTSFQ9UBX1 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CTSFQ9UBX1 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTSFQ9UBX1 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
CTSFQ9UBX1 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTSFQ9UBX1 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CTSFQ9UBX1 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTSFQ9UBX1 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTSFQ9UBX1 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTSFQ9UBX1 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
CTSFQ9UBX1 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTSFQ9UBX1 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.63■□□□□ 0.41
CTSFQ9UBX1 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.63■□□□□ 0.41
CTSFQ9UBX1 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTSFQ9UBX1 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTSFQ9UBX1 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTSFQ9UBX1 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CTSFQ9UBX1 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CTSFQ9UBX1 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.63■□□□□ 0.41
CTSFQ9UBX1 STARP1-201ENST00000397973 869 ntBASIC17.63■□□□□ 0.41
CTSFQ9UBX1 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTSFQ9UBX1 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.63■□□□□ 0.41
CTSFQ9UBX1 AC112907.2-201ENST00000448639 330 ntBASIC17.63■□□□□ 0.41
CTSFQ9UBX1 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTSFQ9UBX1 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.63■□□□□ 0.41
CTSFQ9UBX1 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.63■□□□□ 0.41
CTSFQ9UBX1 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.63■□□□□ 0.41
CTSFQ9UBX1 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.63■□□□□ 0.41
CTSFQ9UBX1 AC005332.7-201ENST00000614046 2005 ntBASIC17.63■□□□□ 0.41
CTSFQ9UBX1 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTSFQ9UBX1 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTSFQ9UBX1 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTSFQ9UBX1 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CTSFQ9UBX1 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTSFQ9UBX1 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTSFQ9UBX1 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.63■□□□□ 0.41
CTSFQ9UBX1 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTSFQ9UBX1 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTSFQ9UBX1 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CTSFQ9UBX1 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.62■□□□□ 0.41
CTSFQ9UBX1 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.62■□□□□ 0.41
CTSFQ9UBX1 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.62■□□□□ 0.41
CTSFQ9UBX1 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CTSFQ9UBX1 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CTSFQ9UBX1 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.62■□□□□ 0.41
CTSFQ9UBX1 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTSFQ9UBX1 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTSFQ9UBX1 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTSFQ9UBX1 AL161938.1-201ENST00000569833 2180 ntBASIC17.62■□□□□ 0.41
CTSFQ9UBX1 AL049812.1-201ENST00000432563 2267 ntBASIC17.62■□□□□ 0.41
CTSFQ9UBX1 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTSFQ9UBX1 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTSFQ9UBX1 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CTSFQ9UBX1 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CTSFQ9UBX1 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CTSFQ9UBX1 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTSFQ9UBX1 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.62■□□□□ 0.41
CTSFQ9UBX1 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.62■□□□□ 0.41
CTSFQ9UBX1 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.62■□□□□ 0.41
CTSFQ9UBX1 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTSFQ9UBX1 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.62■□□□□ 0.41
CTSFQ9UBX1 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.62■□□□□ 0.41
CTSFQ9UBX1 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTSFQ9UBX1 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.62■□□□□ 0.41
CTSFQ9UBX1 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.62■□□□□ 0.41
CTSFQ9UBX1 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTSFQ9UBX1 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.62■□□□□ 0.41
CTSFQ9UBX1 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.62■□□□□ 0.41
CTSFQ9UBX1 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTSFQ9UBX1 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTSFQ9UBX1 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.61■□□□□ 0.41
CTSFQ9UBX1 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTSFQ9UBX1 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.61■□□□□ 0.41
CTSFQ9UBX1 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CTSFQ9UBX1 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CTSFQ9UBX1 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CTSFQ9UBX1 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTSFQ9UBX1 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CTSFQ9UBX1 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms