Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
CTPS2Q9NRF8 RARRES2P10-201ENST00000564312 460 ntBASIC17.46■□□□□ 0.39
CTPS2Q9NRF8 AC090164.3-201ENST00000610780 2143 ntBASIC17.46■□□□□ 0.39
CTPS2Q9NRF8 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.46■□□□□ 0.39
CTPS2Q9NRF8 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTPS2Q9NRF8 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTPS2Q9NRF8 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTPS2Q9NRF8 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTPS2Q9NRF8 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTPS2Q9NRF8 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.46■□□□□ 0.39
CTPS2Q9NRF8 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CTPS2Q9NRF8 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.45■□□□□ 0.38
CTPS2Q9NRF8 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTPS2Q9NRF8 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTPS2Q9NRF8 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTPS2Q9NRF8 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
CTPS2Q9NRF8 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTPS2Q9NRF8 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.45■□□□□ 0.38
CTPS2Q9NRF8 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.45■□□□□ 0.38
CTPS2Q9NRF8 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.45■□□□□ 0.38
CTPS2Q9NRF8 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CTPS2Q9NRF8 ANO7L1-203ENST00000602586 1720 ntBASIC17.45■□□□□ 0.38
CTPS2Q9NRF8 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.45■□□□□ 0.38
CTPS2Q9NRF8 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.45■□□□□ 0.38
CTPS2Q9NRF8 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTPS2Q9NRF8 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CTPS2Q9NRF8 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTPS2Q9NRF8 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CTPS2Q9NRF8 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CTPS2Q9NRF8 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CTPS2Q9NRF8 UBE2SP1-201ENST00000450587 669 ntBASIC17.45■□□□□ 0.38
CTPS2Q9NRF8 RPS2P4-201ENST00000476944 856 ntBASIC17.45■□□□□ 0.38
CTPS2Q9NRF8 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.45■□□□□ 0.38
CTPS2Q9NRF8 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTPS2Q9NRF8 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.45■□□□□ 0.38
CTPS2Q9NRF8 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.45■□□□□ 0.38
CTPS2Q9NRF8 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.45■□□□□ 0.38
CTPS2Q9NRF8 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.45■□□□□ 0.38
CTPS2Q9NRF8 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.45■□□□□ 0.38
CTPS2Q9NRF8 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTPS2Q9NRF8 AL353708.3-201ENST00000610272 989 ntBASIC17.45■□□□□ 0.38
CTPS2Q9NRF8 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.45■□□□□ 0.38
CTPS2Q9NRF8 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CTPS2Q9NRF8 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTPS2Q9NRF8 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTPS2Q9NRF8 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CTPS2Q9NRF8 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTPS2Q9NRF8 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTPS2Q9NRF8 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTPS2Q9NRF8 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.45■□□□□ 0.38
CTPS2Q9NRF8 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTPS2Q9NRF8 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTPS2Q9NRF8 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CTPS2Q9NRF8 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CTPS2Q9NRF8 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CTPS2Q9NRF8 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.44■□□□□ 0.38
CTPS2Q9NRF8 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTPS2Q9NRF8 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.44■□□□□ 0.38
CTPS2Q9NRF8 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTPS2Q9NRF8 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.44■□□□□ 0.38
CTPS2Q9NRF8 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
CTPS2Q9NRF8 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CTPS2Q9NRF8 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.44■□□□□ 0.38
CTPS2Q9NRF8 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.44■□□□□ 0.38
CTPS2Q9NRF8 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.44■□□□□ 0.38
CTPS2Q9NRF8 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CTPS2Q9NRF8 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CTPS2Q9NRF8 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CTPS2Q9NRF8 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTPS2Q9NRF8 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTPS2Q9NRF8 AL353807.1-201ENST00000427475 662 ntBASIC17.44■□□□□ 0.38
CTPS2Q9NRF8 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CTPS2Q9NRF8 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.44■□□□□ 0.38
CTPS2Q9NRF8 AL445675.2-201ENST00000620291 557 ntBASIC17.44■□□□□ 0.38
CTPS2Q9NRF8 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CTPS2Q9NRF8 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTPS2Q9NRF8 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTPS2Q9NRF8 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.44■□□□□ 0.38
CTPS2Q9NRF8 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CTPS2Q9NRF8 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTPS2Q9NRF8 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTPS2Q9NRF8 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.44■□□□□ 0.38
CTPS2Q9NRF8 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.44■□□□□ 0.38
CTPS2Q9NRF8 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CTPS2Q9NRF8 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTPS2Q9NRF8 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTPS2Q9NRF8 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTPS2Q9NRF8 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.43■□□□□ 0.38
CTPS2Q9NRF8 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.43■□□□□ 0.38
CTPS2Q9NRF8 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CTPS2Q9NRF8 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CTPS2Q9NRF8 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTPS2Q9NRF8 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.43■□□□□ 0.38
CTPS2Q9NRF8 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CTPS2Q9NRF8 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTPS2Q9NRF8 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.43■□□□□ 0.38
CTPS2Q9NRF8 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTPS2Q9NRF8 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.43■□□□□ 0.38
CTPS2Q9NRF8 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CTPS2Q9NRF8 TSPY21P-201ENST00000433481 731 ntBASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms