Protein–RNA interactions for Protein: Q9NQP4

PFDN4, Prefoldin subunit 4, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4Q9NQP4 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PFDN4Q9NQP4 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PFDN4Q9NQP4 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
PFDN4Q9NQP4 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PFDN4Q9NQP4 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PFDN4Q9NQP4 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PFDN4Q9NQP4 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.46■□□□□ 0.55
PFDN4Q9NQP4 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PFDN4Q9NQP4 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PFDN4Q9NQP4 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PFDN4Q9NQP4 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.46■□□□□ 0.55
PFDN4Q9NQP4 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PFDN4Q9NQP4 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PFDN4Q9NQP4 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.46■□□□□ 0.55
PFDN4Q9NQP4 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.46■□□□□ 0.55
PFDN4Q9NQP4 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.46■□□□□ 0.55
PFDN4Q9NQP4 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PFDN4Q9NQP4 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.46■□□□□ 0.55
PFDN4Q9NQP4 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.46■□□□□ 0.55
PFDN4Q9NQP4 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PFDN4Q9NQP4 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PFDN4Q9NQP4 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
PFDN4Q9NQP4 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PFDN4Q9NQP4 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
PFDN4Q9NQP4 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PFDN4Q9NQP4 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PFDN4Q9NQP4 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PFDN4Q9NQP4 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
PFDN4Q9NQP4 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PFDN4Q9NQP4 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.46■□□□□ 0.55
PFDN4Q9NQP4 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.46■□□□□ 0.55
PFDN4Q9NQP4 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
PFDN4Q9NQP4 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.45■□□□□ 0.54
PFDN4Q9NQP4 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PFDN4Q9NQP4 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.45■□□□□ 0.54
PFDN4Q9NQP4 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
PFDN4Q9NQP4 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PFDN4Q9NQP4 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PFDN4Q9NQP4 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.45■□□□□ 0.54
PFDN4Q9NQP4 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PFDN4Q9NQP4 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.45■□□□□ 0.54
PFDN4Q9NQP4 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PFDN4Q9NQP4 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PFDN4Q9NQP4 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PFDN4Q9NQP4 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PFDN4Q9NQP4 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.45■□□□□ 0.54
PFDN4Q9NQP4 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.45■□□□□ 0.54
PFDN4Q9NQP4 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.45■□□□□ 0.54
PFDN4Q9NQP4 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.45■□□□□ 0.54
PFDN4Q9NQP4 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.45■□□□□ 0.54
PFDN4Q9NQP4 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.45■□□□□ 0.54
PFDN4Q9NQP4 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.45■□□□□ 0.54
PFDN4Q9NQP4 AP003097.1-201ENST00000530657 1135 ntBASIC18.45■□□□□ 0.54
PFDN4Q9NQP4 KRT18P6-201ENST00000555540 1265 ntBASIC18.45■□□□□ 0.54
PFDN4Q9NQP4 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.45■□□□□ 0.54
PFDN4Q9NQP4 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.45■□□□□ 0.54
PFDN4Q9NQP4 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PFDN4Q9NQP4 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
PFDN4Q9NQP4 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
PFDN4Q9NQP4 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.45■□□□□ 0.54
PFDN4Q9NQP4 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
PFDN4Q9NQP4 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.45■□□□□ 0.54
PFDN4Q9NQP4 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.45■□□□□ 0.54
PFDN4Q9NQP4 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PFDN4Q9NQP4 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PFDN4Q9NQP4 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.45■□□□□ 0.54
PFDN4Q9NQP4 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.45■□□□□ 0.54
PFDN4Q9NQP4 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.45■□□□□ 0.54
PFDN4Q9NQP4 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
PFDN4Q9NQP4 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PFDN4Q9NQP4 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
PFDN4Q9NQP4 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
PFDN4Q9NQP4 AL133373.2-201ENST00000623187 2828 ntBASIC18.44■□□□□ 0.54
PFDN4Q9NQP4 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PFDN4Q9NQP4 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PFDN4Q9NQP4 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PFDN4Q9NQP4 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PFDN4Q9NQP4 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PFDN4Q9NQP4 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
PFDN4Q9NQP4 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.44■□□□□ 0.54
PFDN4Q9NQP4 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.44■□□□□ 0.54
PFDN4Q9NQP4 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
PFDN4Q9NQP4 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.44■□□□□ 0.54
PFDN4Q9NQP4 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.44■□□□□ 0.54
PFDN4Q9NQP4 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.44■□□□□ 0.54
PFDN4Q9NQP4 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.44■□□□□ 0.54
PFDN4Q9NQP4 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PFDN4Q9NQP4 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.44■□□□□ 0.54
PFDN4Q9NQP4 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PFDN4Q9NQP4 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PFDN4Q9NQP4 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.44■□□□□ 0.54
PFDN4Q9NQP4 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PFDN4Q9NQP4 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
PFDN4Q9NQP4 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
PFDN4Q9NQP4 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
PFDN4Q9NQP4 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PFDN4Q9NQP4 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
PFDN4Q9NQP4 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
PFDN4Q9NQP4 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PFDN4Q9NQP4 AC135050.7-201ENST00000624508 2218 ntBASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms