Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATP6V0A4Q9HBG4 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.83■□□□□ 0.93
ATP6V0A4Q9HBG4 AL109659.2-201ENST00000606809 1674 ntBASIC20.83■□□□□ 0.93
ATP6V0A4Q9HBG4 LETM1P2-201ENST00000597330 2178 ntBASIC20.83■□□□□ 0.93
ATP6V0A4Q9HBG4 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATP6V0A4Q9HBG4 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATP6V0A4Q9HBG4 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ATP6V0A4Q9HBG4 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATP6V0A4Q9HBG4 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ATP6V0A4Q9HBG4 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATP6V0A4Q9HBG4 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATP6V0A4Q9HBG4 AL049812.1-201ENST00000432563 2267 ntBASIC20.83■□□□□ 0.93
ATP6V0A4Q9HBG4 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATP6V0A4Q9HBG4 Telomerase-vert.1-201ENST00000363312 438 ntBASIC20.83■□□□□ 0.93
ATP6V0A4Q9HBG4 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20.83■□□□□ 0.93
ATP6V0A4Q9HBG4 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.83■□□□□ 0.93
ATP6V0A4Q9HBG4 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.83■□□□□ 0.93
ATP6V0A4Q9HBG4 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
ATP6V0A4Q9HBG4 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATP6V0A4Q9HBG4 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ATP6V0A4Q9HBG4 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.83■□□□□ 0.92
ATP6V0A4Q9HBG4 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
ATP6V0A4Q9HBG4 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.83■□□□□ 0.92
ATP6V0A4Q9HBG4 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ATP6V0A4Q9HBG4 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ATP6V0A4Q9HBG4 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
ATP6V0A4Q9HBG4 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
ATP6V0A4Q9HBG4 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
ATP6V0A4Q9HBG4 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP6V0A4Q9HBG4 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP6V0A4Q9HBG4 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ATP6V0A4Q9HBG4 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.82■□□□□ 0.92
ATP6V0A4Q9HBG4 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP6V0A4Q9HBG4 AP000523.1-201ENST00000398242 1049 ntBASIC20.82■□□□□ 0.92
ATP6V0A4Q9HBG4 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ATP6V0A4Q9HBG4 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP6V0A4Q9HBG4 HOMER2P1-201ENST00000455653 964 ntBASIC20.82■□□□□ 0.92
ATP6V0A4Q9HBG4 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC20.82■□□□□ 0.92
ATP6V0A4Q9HBG4 NEK4P2-201ENST00000580004 1012 ntBASIC20.82■□□□□ 0.92
ATP6V0A4Q9HBG4 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.82■□□□□ 0.92
ATP6V0A4Q9HBG4 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.82■□□□□ 0.92
ATP6V0A4Q9HBG4 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP6V0A4Q9HBG4 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP6V0A4Q9HBG4 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ATP6V0A4Q9HBG4 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
ATP6V0A4Q9HBG4 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP6V0A4Q9HBG4 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
ATP6V0A4Q9HBG4 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC20.82■□□□□ 0.92
ATP6V0A4Q9HBG4 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP6V0A4Q9HBG4 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP6V0A4Q9HBG4 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ATP6V0A4Q9HBG4 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATP6V0A4Q9HBG4 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP6V0A4Q9HBG4 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP6V0A4Q9HBG4 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.81■□□□□ 0.92
ATP6V0A4Q9HBG4 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.81■□□□□ 0.92
ATP6V0A4Q9HBG4 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATP6V0A4Q9HBG4 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP6V0A4Q9HBG4 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP6V0A4Q9HBG4 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.81■□□□□ 0.92
ATP6V0A4Q9HBG4 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP6V0A4Q9HBG4 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
ATP6V0A4Q9HBG4 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP6V0A4Q9HBG4 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.81■□□□□ 0.92
ATP6V0A4Q9HBG4 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC20.81■□□□□ 0.92
ATP6V0A4Q9HBG4 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC20.81■□□□□ 0.92
ATP6V0A4Q9HBG4 AL023973.1-201ENST00000624619 620 ntBASIC20.81■□□□□ 0.92
ATP6V0A4Q9HBG4 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.81■□□□□ 0.92
ATP6V0A4Q9HBG4 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP6V0A4Q9HBG4 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATP6V0A4Q9HBG4 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATP6V0A4Q9HBG4 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP6V0A4Q9HBG4 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP6V0A4Q9HBG4 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATP6V0A4Q9HBG4 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP6V0A4Q9HBG4 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP6V0A4Q9HBG4 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ATP6V0A4Q9HBG4 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ATP6V0A4Q9HBG4 AC008556.1-201ENST00000610908 2040 ntBASIC20.8■□□□□ 0.92
ATP6V0A4Q9HBG4 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
ATP6V0A4Q9HBG4 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP6V0A4Q9HBG4 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
ATP6V0A4Q9HBG4 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.8■□□□□ 0.92
ATP6V0A4Q9HBG4 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.8■□□□□ 0.92
ATP6V0A4Q9HBG4 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP6V0A4Q9HBG4 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.8■□□□□ 0.92
ATP6V0A4Q9HBG4 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.8■□□□□ 0.92
ATP6V0A4Q9HBG4 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.8■□□□□ 0.92
ATP6V0A4Q9HBG4 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP6V0A4Q9HBG4 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.8■□□□□ 0.92
ATP6V0A4Q9HBG4 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP6V0A4Q9HBG4 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
ATP6V0A4Q9HBG4 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.8■□□□□ 0.92
ATP6V0A4Q9HBG4 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP6V0A4Q9HBG4 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.8■□□□□ 0.92
ATP6V0A4Q9HBG4 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ATP6V0A4Q9HBG4 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP6V0A4Q9HBG4 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
ATP6V0A4Q9HBG4 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.8■□□□□ 0.92
ATP6V0A4Q9HBG4 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms