Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.55■□□□□ 0.4
AMBRA1Q9C0C7 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
AMBRA1Q9C0C7 AC073648.6-201ENST00000641589 218 ntBASIC17.55■□□□□ 0.4
AMBRA1Q9C0C7 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
AMBRA1Q9C0C7 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AMBRA1Q9C0C7 AC073592.3-201ENST00000625118 1834 ntBASIC17.55■□□□□ 0.4
AMBRA1Q9C0C7 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
AMBRA1Q9C0C7 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AMBRA1Q9C0C7 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
AMBRA1Q9C0C7 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.55■□□□□ 0.4
AMBRA1Q9C0C7 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AMBRA1Q9C0C7 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AMBRA1Q9C0C7 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AMBRA1Q9C0C7 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
AMBRA1Q9C0C7 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
AMBRA1Q9C0C7 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AMBRA1Q9C0C7 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
AMBRA1Q9C0C7 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
AMBRA1Q9C0C7 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
AMBRA1Q9C0C7 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AMBRA1Q9C0C7 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
AMBRA1Q9C0C7 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
AMBRA1Q9C0C7 AC126763.1-201ENST00000552015 2118 ntBASIC17.54■□□□□ 0.4
AMBRA1Q9C0C7 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.54■□□□□ 0.4
AMBRA1Q9C0C7 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
AMBRA1Q9C0C7 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
AMBRA1Q9C0C7 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
AMBRA1Q9C0C7 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
AMBRA1Q9C0C7 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
AMBRA1Q9C0C7 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
AMBRA1Q9C0C7 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.54■□□□□ 0.4
AMBRA1Q9C0C7 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.54■□□□□ 0.4
AMBRA1Q9C0C7 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.54■□□□□ 0.4
AMBRA1Q9C0C7 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.54■□□□□ 0.4
AMBRA1Q9C0C7 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.54■□□□□ 0.4
AMBRA1Q9C0C7 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
AMBRA1Q9C0C7 AC069544.1-201ENST00000609399 999 ntBASIC17.54■□□□□ 0.4
AMBRA1Q9C0C7 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
AMBRA1Q9C0C7 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
AMBRA1Q9C0C7 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
AMBRA1Q9C0C7 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
AMBRA1Q9C0C7 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.54■□□□□ 0.4
AMBRA1Q9C0C7 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
AMBRA1Q9C0C7 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.54■□□□□ 0.4
AMBRA1Q9C0C7 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
AMBRA1Q9C0C7 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
AMBRA1Q9C0C7 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
AMBRA1Q9C0C7 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
AMBRA1Q9C0C7 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
AMBRA1Q9C0C7 ESPNP-201ENST00000270691 2015 ntBASIC17.54■□□□□ 0.4
AMBRA1Q9C0C7 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
AMBRA1Q9C0C7 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
AMBRA1Q9C0C7 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
AMBRA1Q9C0C7 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.53■□□□□ 0.4
AMBRA1Q9C0C7 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
AMBRA1Q9C0C7 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.53■□□□□ 0.4
AMBRA1Q9C0C7 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
AMBRA1Q9C0C7 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
AMBRA1Q9C0C7 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.53■□□□□ 0.4
AMBRA1Q9C0C7 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
AMBRA1Q9C0C7 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
AMBRA1Q9C0C7 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
AMBRA1Q9C0C7 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.53■□□□□ 0.4
AMBRA1Q9C0C7 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.53■□□□□ 0.4
AMBRA1Q9C0C7 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.53■□□□□ 0.4
AMBRA1Q9C0C7 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
AMBRA1Q9C0C7 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
AMBRA1Q9C0C7 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
AMBRA1Q9C0C7 TSPY23P-201ENST00000440136 739 ntBASIC17.53■□□□□ 0.4
AMBRA1Q9C0C7 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.53■□□□□ 0.4
AMBRA1Q9C0C7 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.53■□□□□ 0.4
AMBRA1Q9C0C7 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.53■□□□□ 0.4
AMBRA1Q9C0C7 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.53■□□□□ 0.4
AMBRA1Q9C0C7 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.53■□□□□ 0.4
AMBRA1Q9C0C7 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
AMBRA1Q9C0C7 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
AMBRA1Q9C0C7 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
AMBRA1Q9C0C7 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
AMBRA1Q9C0C7 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
AMBRA1Q9C0C7 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
AMBRA1Q9C0C7 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
AMBRA1Q9C0C7 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.53■□□□□ 0.4
AMBRA1Q9C0C7 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
AMBRA1Q9C0C7 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.53■□□□□ 0.4
AMBRA1Q9C0C7 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.52■□□□□ 0.4
AMBRA1Q9C0C7 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
AMBRA1Q9C0C7 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.52■□□□□ 0.4
AMBRA1Q9C0C7 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.52■□□□□ 0.4
AMBRA1Q9C0C7 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
AMBRA1Q9C0C7 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
AMBRA1Q9C0C7 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
AMBRA1Q9C0C7 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
AMBRA1Q9C0C7 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
AMBRA1Q9C0C7 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
AMBRA1Q9C0C7 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.52■□□□□ 0.4
AMBRA1Q9C0C7 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.52■□□□□ 0.4
AMBRA1Q9C0C7 AL160286.2-201ENST00000567150 934 ntBASIC17.52■□□□□ 0.4
AMBRA1Q9C0C7 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
AMBRA1Q9C0C7 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
AMBRA1Q9C0C7 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms