Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 TSPY23P-201ENST00000440136 739 ntBASIC16.11■□□□□ 0.17
NICN1Q9BSH3 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC16.11■□□□□ 0.17
NICN1Q9BSH3 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NICN1Q9BSH3 RGMA-211ENST00000557420 989 ntTSL 3 BASIC16.11■□□□□ 0.17
NICN1Q9BSH3 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC16.11■□□□□ 0.17
NICN1Q9BSH3 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.11■□□□□ 0.17
NICN1Q9BSH3 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC16.11■□□□□ 0.17
NICN1Q9BSH3 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC16.11■□□□□ 0.17
NICN1Q9BSH3 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
NICN1Q9BSH3 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.11■□□□□ 0.17
NICN1Q9BSH3 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NICN1Q9BSH3 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.11■□□□□ 0.17
NICN1Q9BSH3 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
NICN1Q9BSH3 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NICN1Q9BSH3 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.11■□□□□ 0.17
NICN1Q9BSH3 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.11■□□□□ 0.17
NICN1Q9BSH3 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
NICN1Q9BSH3 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.11■□□□□ 0.17
NICN1Q9BSH3 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NICN1Q9BSH3 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.11■□□□□ 0.17
NICN1Q9BSH3 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.11■□□□□ 0.17
NICN1Q9BSH3 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
NICN1Q9BSH3 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC16.11■□□□□ 0.17
NICN1Q9BSH3 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NICN1Q9BSH3 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
NICN1Q9BSH3 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.1■□□□□ 0.17
NICN1Q9BSH3 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
NICN1Q9BSH3 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.1■□□□□ 0.17
NICN1Q9BSH3 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.1■□□□□ 0.17
NICN1Q9BSH3 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NICN1Q9BSH3 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NICN1Q9BSH3 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NICN1Q9BSH3 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
NICN1Q9BSH3 AC067852.2-201ENST00000590513 2313 ntBASIC16.1■□□□□ 0.17
NICN1Q9BSH3 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.1■□□□□ 0.17
NICN1Q9BSH3 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
NICN1Q9BSH3 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NICN1Q9BSH3 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NICN1Q9BSH3 NCF1B-203ENST00000435988 1254 ntBASIC16.1■□□□□ 0.17
NICN1Q9BSH3 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC16.1■□□□□ 0.17
NICN1Q9BSH3 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.1■□□□□ 0.17
NICN1Q9BSH3 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NICN1Q9BSH3 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC16.1■□□□□ 0.17
NICN1Q9BSH3 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC16.1■□□□□ 0.17
NICN1Q9BSH3 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
NICN1Q9BSH3 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NICN1Q9BSH3 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.1■□□□□ 0.17
NICN1Q9BSH3 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
NICN1Q9BSH3 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NICN1Q9BSH3 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NICN1Q9BSH3 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
NICN1Q9BSH3 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
NICN1Q9BSH3 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
NICN1Q9BSH3 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
NICN1Q9BSH3 AC073592.3-201ENST00000625118 1834 ntBASIC16.1■□□□□ 0.17
NICN1Q9BSH3 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NICN1Q9BSH3 LTB4R2-202ENST00000528054 3092 ntBASIC16.1■□□□□ 0.17
NICN1Q9BSH3 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.1■□□□□ 0.17
NICN1Q9BSH3 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
NICN1Q9BSH3 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NICN1Q9BSH3 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
NICN1Q9BSH3 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NICN1Q9BSH3 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NICN1Q9BSH3 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NICN1Q9BSH3 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
NICN1Q9BSH3 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.09■□□□□ 0.17
NICN1Q9BSH3 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NICN1Q9BSH3 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
NICN1Q9BSH3 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NICN1Q9BSH3 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NICN1Q9BSH3 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
NICN1Q9BSH3 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
NICN1Q9BSH3 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC16.09■□□□□ 0.17
NICN1Q9BSH3 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC16.09■□□□□ 0.17
NICN1Q9BSH3 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
NICN1Q9BSH3 PFKL-212ENST00000628044 129 ntTSL 3 BASIC16.09■□□□□ 0.17
NICN1Q9BSH3 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NICN1Q9BSH3 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NICN1Q9BSH3 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NICN1Q9BSH3 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NICN1Q9BSH3 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NICN1Q9BSH3 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NICN1Q9BSH3 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.09■□□□□ 0.17
NICN1Q9BSH3 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NICN1Q9BSH3 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NICN1Q9BSH3 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.09■□□□□ 0.17
NICN1Q9BSH3 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NICN1Q9BSH3 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
NICN1Q9BSH3 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
NICN1Q9BSH3 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.09■□□□□ 0.17
NICN1Q9BSH3 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NICN1Q9BSH3 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NICN1Q9BSH3 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
NICN1Q9BSH3 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
NICN1Q9BSH3 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
NICN1Q9BSH3 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.17
NICN1Q9BSH3 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.08■□□□□ 0.16
NICN1Q9BSH3 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NICN1Q9BSH3 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.08■□□□□ 0.16
NICN1Q9BSH3 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms