Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.46■□□□□ 0.71
HERPUD2Q9BSE4 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.46■□□□□ 0.71
HERPUD2Q9BSE4 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.46■□□□□ 0.71
HERPUD2Q9BSE4 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HERPUD2Q9BSE4 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
HERPUD2Q9BSE4 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HERPUD2Q9BSE4 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.45■□□□□ 0.7
HERPUD2Q9BSE4 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
HERPUD2Q9BSE4 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HERPUD2Q9BSE4 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HERPUD2Q9BSE4 AC068880.1-201ENST00000507289 2297 ntBASIC19.45■□□□□ 0.7
HERPUD2Q9BSE4 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HERPUD2Q9BSE4 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HERPUD2Q9BSE4 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
HERPUD2Q9BSE4 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.45■□□□□ 0.7
HERPUD2Q9BSE4 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
HERPUD2Q9BSE4 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HERPUD2Q9BSE4 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
HERPUD2Q9BSE4 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HERPUD2Q9BSE4 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HERPUD2Q9BSE4 B3GAT3P1-201ENST00000471720 806 ntBASIC19.45■□□□□ 0.7
HERPUD2Q9BSE4 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HERPUD2Q9BSE4 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HERPUD2Q9BSE4 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HERPUD2Q9BSE4 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HERPUD2Q9BSE4 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HERPUD2Q9BSE4 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.45■□□□□ 0.7
HERPUD2Q9BSE4 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HERPUD2Q9BSE4 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
HERPUD2Q9BSE4 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HERPUD2Q9BSE4 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.44■□□□□ 0.7
HERPUD2Q9BSE4 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HERPUD2Q9BSE4 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
HERPUD2Q9BSE4 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.44■□□□□ 0.7
HERPUD2Q9BSE4 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.44■□□□□ 0.7
HERPUD2Q9BSE4 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.44■□□□□ 0.7
HERPUD2Q9BSE4 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.44■□□□□ 0.7
HERPUD2Q9BSE4 AC079598.2-202ENST00000546624 1451 ntBASIC19.44■□□□□ 0.7
HERPUD2Q9BSE4 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.44■□□□□ 0.7
HERPUD2Q9BSE4 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.44■□□□□ 0.7
HERPUD2Q9BSE4 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
HERPUD2Q9BSE4 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.44■□□□□ 0.7
HERPUD2Q9BSE4 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.44■□□□□ 0.7
HERPUD2Q9BSE4 RARRES2P10-201ENST00000564312 460 ntBASIC19.44■□□□□ 0.7
HERPUD2Q9BSE4 AC008622.2-201ENST00000617006 1229 ntBASIC19.44■□□□□ 0.7
HERPUD2Q9BSE4 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
HERPUD2Q9BSE4 ABALON-201ENST00000629058 1903 ntBASIC19.44■□□□□ 0.7
HERPUD2Q9BSE4 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
HERPUD2Q9BSE4 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.44■□□□□ 0.7
HERPUD2Q9BSE4 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HERPUD2Q9BSE4 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HERPUD2Q9BSE4 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HERPUD2Q9BSE4 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.44■□□□□ 0.7
HERPUD2Q9BSE4 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
HERPUD2Q9BSE4 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.44■□□□□ 0.7
HERPUD2Q9BSE4 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HERPUD2Q9BSE4 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.43■□□□□ 0.7
HERPUD2Q9BSE4 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.43■□□□□ 0.7
HERPUD2Q9BSE4 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
HERPUD2Q9BSE4 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
HERPUD2Q9BSE4 NOC2LP2-201ENST00000407594 1944 ntBASIC19.43■□□□□ 0.7
HERPUD2Q9BSE4 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
HERPUD2Q9BSE4 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
HERPUD2Q9BSE4 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HERPUD2Q9BSE4 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.43■□□□□ 0.7
HERPUD2Q9BSE4 RCC2P3-201ENST00000418112 1537 ntBASIC19.43■□□□□ 0.7
HERPUD2Q9BSE4 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HERPUD2Q9BSE4 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
HERPUD2Q9BSE4 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HERPUD2Q9BSE4 AC026271.3-201ENST00000571884 352 ntBASIC19.43■□□□□ 0.7
HERPUD2Q9BSE4 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.43■□□□□ 0.7
HERPUD2Q9BSE4 AL031985.4-201ENST00000642138 673 ntBASIC19.43■□□□□ 0.7
HERPUD2Q9BSE4 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HERPUD2Q9BSE4 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
HERPUD2Q9BSE4 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HERPUD2Q9BSE4 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HERPUD2Q9BSE4 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.42■□□□□ 0.7
HERPUD2Q9BSE4 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HERPUD2Q9BSE4 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HERPUD2Q9BSE4 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
HERPUD2Q9BSE4 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.42■□□□□ 0.7
HERPUD2Q9BSE4 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
HERPUD2Q9BSE4 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HERPUD2Q9BSE4 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.42■□□□□ 0.7
HERPUD2Q9BSE4 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.42■□□□□ 0.7
HERPUD2Q9BSE4 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.42■□□□□ 0.7
HERPUD2Q9BSE4 AC073195.1-201ENST00000607241 877 ntBASIC19.42■□□□□ 0.7
HERPUD2Q9BSE4 MIR6786-201ENST00000616843 113 ntBASIC19.42■□□□□ 0.7
HERPUD2Q9BSE4 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HERPUD2Q9BSE4 AC067852.2-201ENST00000590513 2313 ntBASIC19.42■□□□□ 0.7
HERPUD2Q9BSE4 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HERPUD2Q9BSE4 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
HERPUD2Q9BSE4 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.42■□□□□ 0.7
HERPUD2Q9BSE4 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HERPUD2Q9BSE4 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HERPUD2Q9BSE4 AL135905.2-201ENST00000584934 1404 ntBASIC19.42■□□□□ 0.7
HERPUD2Q9BSE4 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.41■□□□□ 0.7
HERPUD2Q9BSE4 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.41■□□□□ 0.7
HERPUD2Q9BSE4 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.41■□□□□ 0.7
HERPUD2Q9BSE4 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms