Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC14.23□□□□□ -0.13
VGLL1Q99990 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC14.23□□□□□ -0.13
VGLL1Q99990 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VGLL1Q99990 MADD-208ENST00000405573 1823 ntTSL 5 BASIC14.23□□□□□ -0.13
VGLL1Q99990 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VGLL1Q99990 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC14.23□□□□□ -0.13
VGLL1Q99990 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VGLL1Q99990 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC14.23□□□□□ -0.13
VGLL1Q99990 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
VGLL1Q99990 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
VGLL1Q99990 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VGLL1Q99990 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VGLL1Q99990 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VGLL1Q99990 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VGLL1Q99990 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC14.23□□□□□ -0.13
VGLL1Q99990 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
VGLL1Q99990 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VGLL1Q99990 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VGLL1Q99990 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VGLL1Q99990 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
VGLL1Q99990 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC14.23□□□□□ -0.13
VGLL1Q99990 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC14.23□□□□□ -0.13
VGLL1Q99990 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VGLL1Q99990 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
VGLL1Q99990 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC14.23□□□□□ -0.13
VGLL1Q99990 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC14.23□□□□□ -0.13
VGLL1Q99990 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VGLL1Q99990 AC126763.1-201ENST00000552015 2118 ntBASIC14.23□□□□□ -0.13
VGLL1Q99990 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VGLL1Q99990 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
VGLL1Q99990 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC14.23□□□□□ -0.13
VGLL1Q99990 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC14.23□□□□□ -0.13
VGLL1Q99990 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
VGLL1Q99990 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VGLL1Q99990 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC14.22□□□□□ -0.13
VGLL1Q99990 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
VGLL1Q99990 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
VGLL1Q99990 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VGLL1Q99990 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC14.22□□□□□ -0.13
VGLL1Q99990 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VGLL1Q99990 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC14.22□□□□□ -0.13
VGLL1Q99990 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
VGLL1Q99990 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VGLL1Q99990 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
VGLL1Q99990 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC14.22□□□□□ -0.13
VGLL1Q99990 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
VGLL1Q99990 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VGLL1Q99990 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VGLL1Q99990 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
VGLL1Q99990 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC14.22□□□□□ -0.13
VGLL1Q99990 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VGLL1Q99990 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VGLL1Q99990 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC14.22□□□□□ -0.13
VGLL1Q99990 THEM4-205ENST00000489410 643 ntTSL 2 BASIC14.22□□□□□ -0.13
VGLL1Q99990 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC14.22□□□□□ -0.13
VGLL1Q99990 AL160286.2-201ENST00000567150 934 ntBASIC14.22□□□□□ -0.13
VGLL1Q99990 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VGLL1Q99990 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VGLL1Q99990 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC14.22□□□□□ -0.13
VGLL1Q99990 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC14.22□□□□□ -0.13
VGLL1Q99990 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC14.22□□□□□ -0.13
VGLL1Q99990 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC14.22□□□□□ -0.13
VGLL1Q99990 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
VGLL1Q99990 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VGLL1Q99990 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC14.22□□□□□ -0.13
VGLL1Q99990 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VGLL1Q99990 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
VGLL1Q99990 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
VGLL1Q99990 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VGLL1Q99990 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
VGLL1Q99990 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
VGLL1Q99990 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VGLL1Q99990 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
VGLL1Q99990 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VGLL1Q99990 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
VGLL1Q99990 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VGLL1Q99990 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
VGLL1Q99990 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
VGLL1Q99990 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VGLL1Q99990 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC14.21□□□□□ -0.13
VGLL1Q99990 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
VGLL1Q99990 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VGLL1Q99990 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC14.21□□□□□ -0.13
VGLL1Q99990 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC14.21□□□□□ -0.13
VGLL1Q99990 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC14.21□□□□□ -0.13
VGLL1Q99990 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC14.21□□□□□ -0.13
VGLL1Q99990 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
VGLL1Q99990 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
VGLL1Q99990 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VGLL1Q99990 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
VGLL1Q99990 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
VGLL1Q99990 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
VGLL1Q99990 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
VGLL1Q99990 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VGLL1Q99990 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VGLL1Q99990 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC14.21□□□□□ -0.13
VGLL1Q99990 TSPY23P-201ENST00000440136 739 ntBASIC14.21□□□□□ -0.13
VGLL1Q99990 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC14.21□□□□□ -0.13
VGLL1Q99990 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC14.21□□□□□ -0.13
VGLL1Q99990 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms